Supplemental Table of BAC-ends Used for SNP Discovery in:

Parker H.G., Kim L.V., Sutter N.B., Carlson S., Lorentzen T.D., Malek T.B., Johnson G.J., DeFrance H.B., Ostrander E.A., and Kruglyak L. (2004) Genetic Structure of the Purebred Domestic Dog. Science, Vol 304, Issue 5674, 1160-1164 , 21 May 2004

BAC BAC-end Which Primer ReSequenced From? CFA Fragment Size Forward Primer Reverse Primer   Sequence (including primers)
372-C5 T7 Forward 6 337 gcttttggacaactttggatag tgtgatctacgtcactctctgg gcttttggacaactttggatagactcctttctctggaatgacttccagcatatggtgcagcttcaaggccagagaagagaccagatgacctttcaagtgtccttccagtccaaagNNNNNNNNttccaatactgagggttttcaaactggtgttggtatttgcttttcaaagagagacagactgagtttctcatatcaaatccctatagcctcataaaagcacttttcagttttattttccatcagaaattcctatgaaaagcatttgaagtttcaaaagctccctacacccaagNNgctgattgagattttagcccagagagtgacgtagatcaca
372-C15 T7 Forward 37 341 gaattccaaatgtcctgcttag tctttcatctaccaagggtgtg gaattccaaatgtcctgcttagggtccagcaggatagagggatagNNNNNNNNNNNNtgaggtaggaggaaacagtgacttttccagaaacagtgcaacatttctcctgcatttttaacctctatagatgatactcatttctcattagccagagttcctgcattccattggcagtaagttgtccatcagaatccctgaaaNNacaactttgggtgaactggaagccattcacactttgccagttgggtaatgccagttagtacatacctttctcataaggttttgaatacctgNNNNNNNNNNNNNNccaatgaatacccacacccttggtagatgaaaga
372-E2 SP6 both 31 302 aagcatacttccctgaaatgag tgtatcagccataaagtgttgg aagcatacttccctgaaatgaggcttcactatctgatttgctttggctaataaatataaatagaagtgagatgggtcacttctaggctgtagctttaagggcaggatgtgtgtcgctaaattctcctcttctcctgccataatgactgacatcagNNNttctccatcagcttggggcctgaagtgtaatgatgtagagaagaaccaggcttatgtaagtgaggaataaacaaccttgttagaaactacagatatggcggtgtttattactgcagcataatccaacactttatggctgataca
372-E13 T7 Forward 3 408 agtcaaatcgttcattggattc ctgcttgaatgtactccctctc agtcaaatcgttcattggattcccttgcactcagagcttatgagaagagctgacaatgtactcagcagccgtgtccttcttcctaaattattggcttttatttcatcagagtgaaagcccttNNNNNNNcagggtttgaaattgccatcacttcaaatttcctataagcacttcttgcatgtgaatgtttactgaatgcagttaactgttttctaaatttaactagctttaacgaatttgattttcaaactgaaaaagaaataattgatgtcaatttcatttcaattccacaaagagaatggggggtgggcaatgcagaaatcatgtcctgaagcatttacttttattttttaattttttaaagatttgtttatttgagagacagagagagggagtacattcaagcag
372-E15 T7 Reverse 3 381 aaaaggtggcacatatgaaaag aagagtcagaggcttaagggag aaaaggtggcacatatgaaaagttgttgtttttttttttcctaatgtcatggcctgtcacttagacaaaaagcataatgagggaagtttctaagaattataNNNNNNNNNNNgctaatcaaattttaaggaatgtatatggtggtgaggtgaaggatcaagatggcagttgtttgcaaaggaaaggaaggtggaaataaaggagtatccaagagggataatataacaaaaaattattgagtttcagagaaatcaggtgaatggaagatgtaacagggctctaacatgaaNNtggtccaagNNgattcaacataaaaattaccagtcatgggtgcctgagttgttcaaagtcagttaagcctcccttaagcctctgactctt
372-E18 T7 Forward 25 370 acctcatgtatgtcttgttccc tgatcttggggtcctgag acctcatgtatgtcttgttccccaagaacccttcgtccagggattttttttttaaatgtatttattcatgagagacagagagagagagagagaatggggcagagacacaggcagagggagaagcaggctccacacNNNNNNNNNNNNgtggggactcgatcccgggtctccaggatcaggccctggactgaaggtagtgctaaaccgctgagccacctgggctgcccagcctaatcttttttgttgttgttgttttgttttgtttttttaagattctatttattttagagagagagggttaaaaaaactttagcagactccatgctcagcacNNgccccatgagggctcgatctcaggaccccaagatca
372-G17 T7 Forward 3 337 ctctgctaggagaaaaggagag acacaattcagtccattcagc ctctgctaggagaaaaggagagaaactactgcttttcctatggattttaacctccacctttcaattttttcccctgggtaagggacagggtaggattggaacagNgggcaggcagattgtNNNNNNNNNNtatctgggattgaatatgggttgtaatagctttagaaattgtcatttctcttgccttgaccagccagttttctgggaagtagaggatatgaaagcatttgtgctcttccagaataagatgtgtattcatgaaattagttgttgctcttaaataaaatgcttccttatgtacaaaattctcNagcaggctgaatggactgaattgtgt
372-I23 SP6 Forward 1 480 caaatggttcaagaggagattc taaccattgtaggttcctgtcc caaatggttcaagaggagattcttgtaatagttctgctattggcaaggtggtaggaggaggctttcaggacacagcagcaaggtgttttaNNNNNNNNNNNctcactgtgttatggctctcctgaggttccagtccattgggagtatatgggtgaaaccttaaatctcaaagggatcttccttaagactgacatgtactatagtcagtcacttgatacatgaggcagatgacccagacaaaagtggctactactagggtgtccacatatggctacacagtagaatcacctggagagcttttacgatcccagtgcccaagtcataacctattcaaattaaattacagtgttggggcNNNgagtcagatagcaatattttttaaagaccccagctgattccagtgcattgcaccttttgcaactaatgggcttatgatttatctaacatcacacaagtggggacaggaacctacaatggtta
372-M6 T7 Forward 8 313 aaagtaaaatcaggtattctcctcc tggcatgcatatctatctgaag aaagtaaaatcaggtattctcctcctaactatgaagaNaNNNtaatttttagagtgaaatctgagttaacaactcctacaatcacaatcttgtttgccaatccagcgttatgagctgcccatcccagaagaaaaaaactNNNNNNNNttgtggtgttatgaaatgagcctgcctatggactccaaaaaaagctagatccagggtgcaatgtccatctttggtcatgcctatcccctcattccagtaattgaccaacatttaggagttagtgtttttcccctatgcttactacttcagatagatatgcatgcca
372-M9 T7 Forward Unknown 336 taggggacacagtttctaaagg gacagacatgtaagaagccctc taggggacacagtttctaaaggctgttcacagtttctagaggcctcccacagtttctgaaggacttttgcagctccctgatacatgaggtcctccaatgtggccaataatttaatccagNNNNNNNNNNNNgcctctagagttagtgtgctagcaagatggagtcttctgtaacataacctaagcacgagaatgacatcctgtcaccttttccgtattttattgctttgcaacaaatcactggtcctgctcaccctcagagggaggcagaagatacagggagataactcctaaacactaagagacaaagaaaatgagggcttcttacatgtctgtc
372-M18 T7 Forward 35 377 tctcaaactgttgaagaccaac ggtctctgctaggaacaaattc tctcaaactgttgaagaccaacagaatgataaaatcttgaaagcaacaNNNNNNNaaaacattcatcatatacaaaggaacaatgagattaacaattaacttctcaaaagagataatagaggccagaagtcagtggatgacatattcaaagtNNNNNNNNNNNNNNNNNNNNctcaaccaactgaacaaaacaaaaaatgaagatgaaaNNgacacttaggtgactctgtcagNNNaacatgcttctcttgatcttggggtcatgagtttgagtgcagagattatttaaggaaataaataaaacctgtatatctttttaaatgaaaatgaacatattcccagaaaaagattgaaagaatttgttcctagcagagacc
372-M23 T7 Forward 3 312 catgtgacccttcctatgagac gaaagtagaggcaatttggttg catgtgacccttcctatgagactgtcacagaaccagcccacactcgggttggccggacctgggtcaatcctcagccgccaNNNNNNNNNNNaggtgcagtgtgcccggagggagcgatggcgtgagctaagcctggggcactggtatcctccagcagtgaggagggaggcaccccaaaaNNtgctttaaatgatcctaacagaaccccacagcgacagacattagccaggagggaagtgaccaagtaaacctgaaccgagacaggaggctttattcaagatcattctcatcaaccaaattgcctctactttc
372-O13 SP6 Forward 4 316 ggaagaccccaactctattattg tcagctgtggttacagattttg ggaagaccccaactctattattgcaggcatgccagtcctcgaggtctggaaatcaaagcaggtaaagtttcagacttgtgtttcattctaacaatcaagtatctcttaaaacatgNNNNNNNNattgtcctggttcacttggtgagaaatgctgatgcctcttaggagtactaggagctagagcaggggtagtgctctcgctatccagcttttgtctatttggtgatcatcagagaacccaagagaatgccctgctcaccattagaactagatgatattatctgggtggattaacaaaatctgtaaccacagctga
373-A10 SP6 Reverse 13 423 agtcttttggtcctaaacatgg cactgtgactcctcactgactg agtcttttggtcctaaacatggtagaaaacatctttgttgcattttttagaattaatctattttaaattgacatattttgcatgtaatatatttttcaggtatataaaNNNNNNNNNNNatatttttatacactgcaaaagatccccatatctggttaacatttgtcaccttatatggtaaaaaaaattttacaaaatttattcttgtgatgaaaacttaagatttactcttagcaacttgcacatatacaatacagtagtagccaacttgctatctgttatatcttcactttgttgctgtgtctaagaagtgacagatgccagtagaggtgtgggatcctatatgaNNaaatcccagtatctgacattgcagagccttctacctgccacctctgagNcaccagtcagtgaggagtcacagtg
373-A15 T7 Forward 18 304 agacacatgcattttcccag aatcttcattgtgaacaggagc agacacatgcattttcccagctgactttttgcacccagtggctcataatcacaatcacatgttatcaacttgcctcatagacccattttttcagccNNNNNNNNNNNgNcagtgtcacatctcaatacagtggccagaaaagtggttcttgcccctggtttgcttaacctgagtatcatggggaacactgtcttctgaattctagctgtgtgatctgtgttcctatttataaccatgttttatctttcagacctgacacaactagtctgatttggacattttgctcctgttcacaatgaagatt
373-A17 T7 Forward 14 316 gtccaaagttggagatgatagg tgaaactgggaaatgttgttatag gtccaaagttggagatgataggttctctcacaataataatgtattgttttcctcttacaccctcactaggcagtccactgctgacccaactgNNNNNNNNtgcactatatcaatttctgactttatggagataaaatagctgtgatgtacccagcttataataaccctccttctacttagagccacttgttctctcctcagttttattttactcctgaaaaaaaccctcttctcttttaaactctattcataggtccttcacatcattttaatcaaaagatttcagggtcttctataacaacatttcccagtttca
373-A21 SP6 Reverse 2 330 aaagcccagctgttgtctg agatagggtgaggacagctacg aaagcccagctgttgtctggagccctgNNNNNNNgaaacactggactttccaggccctcccttgaccttgactttcaagggctctgtccggatgcccttgccttctcctgcctgNNNNNNNNNgggagcaaaggaagctggagctctggttgttgcacaacagaaagtcctggctcctgacactgagtgattaaatgtgatttttcttttaagaaaaaagaagccttttatcatactcctagggctgtcagaaaccattccggtagattttcctaagtcttgttttttcagatgcgaaagtgggaNNccgtagctgtcctcaccctatct
373-C13 SP6 Reverse 1 325 cctgtcctttagaatcctcatc tacacattcaagcaccagagg cctgtcctttagaatcctcatcttgtacatgagagagggatgaagacagggaaggcaggagggacggagggagaaggaagtagctggctattcttctgaattagaatatgataNNNNNNNNNttttaaatcgaaaaataggaaaaattcaaaatctgacaattagcagagggctttttgccctcagaatattgcaaagaatgaacaatcattttataattatgtcctttttgtattttgtatttttgtatggaagttaacacttccatagtaacatacatcttctagaNttatgacctcctttccctctggtgcttgaatgtgta
373-C15 T7 Reverse 34 325 agtcatttattgaagcaaaggg ctctgtacacctggattgagtg agtcatttattgaagcaaagggtgcagggaagggaaggagtagaaaataaaaatgaaaaggaagattaagatcatattcaaaaggcccttataaaattcatttttggataaatctacaacggNNNNNNNNNaccccaaatttggatatttggtctattttcagtctctcatccatgtcaattaacattagaagcaggaagccctgtcctgggactaatggctggctcagagtcatgctacttgacccgatgccctgtaactctacaatcatgggcagggtgccaagcaagaacaagcactccacactcaatccaggtgtacagag
373-E1 T7 Forward 22 315 cgatatttaggaatgaagccac tggtatgcaaataggcacttc cgatatttaggaatgaagccacattcttttcatgacaaagcatatgacctactctacaatctcctgaagccagaatgctcNtacNctagtagtgaacagagatctgaagatctgaagaaaccaaacatagtaaaagaaaagacactgagaggagagaaggggcaagatgcagtgactctcgcaatgcagtgacttaaggcaccaaacccatcagctagctatttaaatagttggaaaataagagtaaaagccaagaaacaaaagataagattgttattaaagggcagaNacNNcgaagtgcctatttgcatacca
373-E21 T7 Reverse 1 315 aaatatctgtttctgaaatatctccc gcagatctagcccgtaatagtg aaatatctgtttctgaaatatctccctaaaaaactgtatatgtctgtatgcatacaattcacgtagtatacagctaccgtgaacgtttcttgcatgatgtcagccagtagggaNNNNNNNNNNNgaccaaactatagcttttgacccatgagcatcaggctgctaaatccccgcaagggccttttacaactttatcctgggcagaagaattttccttggtgtgtttctctcactggtgtgtctctttcagctacttgttttgtgttctgataagcagttagagctcgtaatgacactattacgggctagatctgc
373-G7 T7 Reverse 23 324 tttcctttgcttctggtgc ttgctaactcttctggcttttg tttcctttgcttctggtgctggaNNNNNNctttNNNtgggaatttcatctcctgtttttaagaaaaagaaagatcagggtgtttttcttgtatttgctatttttcaagtgcctctaactcaaaataacactcgtaccacagtgatgtattttggggNNNNNNNNNctgccaccctcagtgtgtatatgtatttgtcaaaagccagtgaattatgcatttaaaataggtacatttttattcgatgtaagctaataccacaatacaatttgatagaatttttaaaatagtttaaaaatagcccccaaaagccagaagagttagcaa
373-G19 T7 Reverse 33 421 ttggtttgatcacctatggaag acatgtgagatacaacttcccc ttggtttgatcacctatggaaggctgaacaaatccgggtaggattagatcgNNNNNNgggagagaacaattctccttgccctctttgggtctctggctgattctgaggattaaactgacttaagacagggtaacaggagaaaagtgtagacacattattgaattNtNNNNNNacatgggaggccttcacttcacaagggagtgaagacccagggacatgaccaaagcaggaagattttaaaccttctgacaaagaaacaatgagtttgtgaagaattgacaaggcacagggatttgggttaggggtagtaaatgctgaaaaattaaggtttgtttatacagccttctcagccctaaagcccctcttggtgataaggctgtgtcccctccttcagtacaaggggaagttgtatctcacatgt
373-I8 SP6 Forward 3 395 acacataactgaagcacaccag aagattgagcatgacttccttg acacataactgaagcacaccagcaatatgacagtaNNNNNNNNNNNNNagggaaaaaatgtatgaacaggatgttgaggttttacttttacttgttgcattcccttaaaaaataataaccattatggcaaaaatatggacttcattttagtggtatctgtgtattcatattattttgcacttttctaaggtttgcattatctcacaattgaaaagaaaaacacgagctaagtaaaatgttaacatatattattgctacatttaaaagNNNacaggaagtttaaaaacaaatgcacccattattcattaatttttcactgctattaagtttaatcaactcttagttttctctctcagNcctaagtagattatttcaaggaagtcatgctcaatctt
373-I16 SP6 Reverse 2 439 taggtgcatcccattctcag aatttgcctcgccttgag taggtgcatcccattctcagggggccattggggccacagcagccttcccNNNNNgcctNNNNNNNNNNNNgccgtggtgtttcctctgcNNNNNNccaggctggggcggcaggcaggggtggggcctcccttggagaaaNNNNagctgcctctgtcctgggctgggctgagctgggagaggccacgccaggtccttctgcccagatgccacctcctccccgctcctcttggcctctccagccgcaggcccggcgcctcccaNNgagtgggacctgctcctgtgagtcagNNNNNNgacNNNNNNNgtgcacagatNNactataNNNNgtatNNNactggtcatgtgtttatttNNNNgagtatcNNNNNNNNNcNNacaagcaattaatgcgcgNaaccctNgatNNcatNNattNNaNNgctcaaggcgaggcaaatt
373-I23 T7 Reverse 13 303 attgtaggcacaatagagcacc caaagatatgggtcttgaaagg attgtaggcacaatagagcaccaggatggctcataagtgccataaccacctctgctcccttagtaggactcactttcctcctcataagagagtatttgaatgcaagggagggNNNNNNNNNgcgccaactgctctaatttgttttaaagagcgaatcagtcccaagtaagtcctgctcgacatacctcacacggtgctgagacgggcttgggaagcaatgctcagttgaatcgcaagatacactctggaagaacagtgaaaaaccagagttgagatgagggcctttcaagacccatatctttg
373-K8 SP6 Forward 7 342 ccaatgatcttgcacagttatg tggtagaggtggtattggagtg ccaatgatcttgcacagttatgttacNNNNNNNNNctttaaaaaacatataactgagtacggtggttccNNNNNNacatcctttaattgctccccagcatctaaaggacaatgcccNNNctcctgaacacggatacggatccccacctcaNNgtcctgtccatttctctcgtatcacttgccatccaccaactccagctcatttactgccatggaaacaaagagagccatcaaatttgagatgttttatgttacNNNNNNNtttagctgaaacatcttttttttgtctagttatagtcctaatcttctttcaNNNNNNtccactccaataccacctctacca
372-C5 S Forward 6 317 ggtaaaccagaagttccccag ctgttgcgaaggctcaag ggtaaaccagaagttccccaggtgaaatggcttttcctccattaccctccccagtcacacaaccagaggaaagtgggctgaaactgagcattcagNgatagaggatggggtgctgagtgNNctNNNNNNacggaggtcccataggtccaagggctgaacccaggtacagggggcgtgagaaaggggcctgagaggtctacgggagactggaaactctgggggcgcagaagcgggggaagaaccctggcgatcacgcctgcgggctggcaaagggacggaaaacccaaNNggggagagaNcttgagccttcgcaacag
372-C15 S Forward 37 325 atttacatggcagtgtgttctg aaaagcccacataacatgagc atttacatggcagtgtgttctggttatctacttctgtataacaaatgaccttaaaatttagtggcttaaaacagtaattcatcattataattcacagttcttNgNgttgactgggccctcttgggtagttcttgcttgcaatctctcatggagttgtagtcaggtacaggctgggaggggctgcaattctctggaggttttagtgagcccagcatccaaaatggtgccctcatatggctggtgattgatagtggctgctgtctgggagctcagctggaactatcaaatggactgtcctcatgtggctc atgttatgtgggctttt
372-E15 S Forward 3 250 attccattttaggtctgcataaag ttttagagagtgcctgccaag attccattttaggtctgcataaaggcaacaatgttgtcaaaagtttagNNNNNNNNNNNNNNtaaaaccaatgaatcacggaagtactaattagtaaaagttgatcatgcacacagagttctaaataagtaaattaatggagagacataatacacttatggattgtagaatttaagatgttagtcatctccaaatttttcaaaagatataataaaatttccatcaacttcttggcaggcactctctaaaa
372-I23 T7 Forward 1 245 aaactctcctatttcacattgacc gaactggcaaatccaatcttac aaactctcctatttcacattgaccatttttctatgaatgaaggaataatatttttataaccctgttcccctccctctgaatgttttatgaaaagaaNNNNNNNNNNNNNNNNaaaattcaagaagtgaaaggaaaattgaattttccttcctcagagaagaagtttaaatcaatcatccttgagaaaaatctaaatggtccaaattatctggagccattttttgtaagattggatttgccagttc
372-M6 S Forward 8 301 gaaccctcctgtctctgtaacc agcaacttgaatcttaaaggaaag acaaaagaaccctcctgtctctgtaaccaNNNNcaagaaggacagtaaggctgggtccttatgtaaacgagcctgagtacatatctaagtgctctcatgcttaagggcagaagttccctNNNNNNNNNNNaaagtaaaggcagagataatttcatctctgaggggaaagggtaaaataatgcttcagcaatcactcaaataggggcagggagcatctgaaaaggattaattcacccgtgcaatagatatctagctaaatctctactatgagtattttctctttctttcctttaagat
372-M7 T7 Forward 4 338 cttttggctttctctgaatttg tgtatccaatttcacattgctg cttttggctttctctgaatttgcataaactccagtaatcttttttttccccctgggttgataatagtgtttgtgttaaaatcacaccttcttttcatttcttgcatgcatataggcttttctcctgtttgtggacacaagtgcttttatctcactctgcaatcagtcacaaccccgggtggaggcagggaacatttgctacaatatttcctatataaacagtttcactgtaaaaggaacaatatggctctaattttgatgtatgatcagtttagaaatatgcaaacacatttgaatatacatcctgtacatgacaacagcaatgtgaaattggataca
372-M18 S Reverse 35 304 taagttccacctgtattgcatc aaacccatcatcacttgtcttc taagttccacctgtattgcatcagattgttgttgaaaaacactgccaataattgcttttNNNNttgccaggctagttgggagtggaaagggggctggaactatggaatcagacctaactatgatctacttcggtccctaaatccctgagtaacaacagcaggcagagcagtgaacctctctgatctacagtttctgcctctgcaaaatgggggtcattcttcccacctcatggaacaccctgtggtcttcagcctatttctagcccggggtaggtgctcagagaagacaagtgatgatgggttt
373-A14 T7 Reverse 31 412 gatcttttgtgctcagtgagag tcataagcagataaatgtttcagg gatcttttgtgctcagtgagagaaNtNNNNNttcaaNNNNNNNNNNNNgNatccaacaaatacaaaaagcNNNNNaacataaaatagacatttataagtcacttgtatgtatattggctttttgtaaattaaatcatgttttatataacattagaaccctgttgggtaaggccccctgaagtaaatggtttgtaatagaaataaattgccctaccacttgtgatgagcatagcataacaaccaaagttgttgaatcactttgttgtacacctgaaactaatgtaacattgtgtgtcaactatactaaaaaataataataaataagtttttatttttaataactgctaaaataaattaaaaatgagtagtgatcctcgtttcagNaatacctgaaacatttatctgcttatga
373-A21 T7 Forward 2 300 ccttatcctaccacagcttcag tgagtttgtgatatttagggctc ccttatcctaccacagcttcagccatgtctccagggcctgtgggatcctagagcactccatcaaggaagcagNgtgaggtgaggggggagctacaNNNNNggcggattgacttgtatctccacNNNNNNNttcctgtcacattttgatgatctgtcctcaggtttatgacaaatgcttattacatggtgtatggagaccagtatacagaaacactcttgtttcctgtaactcattctttttatttttgaattcctacttgatactcctgtctaaaatgagccctaaatatcacaaactca
373-E21 S Forward 1 300 acccacagaatccacaagc aaaataggtgtaaggacaagcc acccacagaatccacaagcataattattgtttaaagcctttgtatttggagccgattgttacaacagcaattatttttttaaaaattgtatttatttattcatgagagacacagaaNNNNNNNNNNNNNNNNNgacacagtgNNNNNNNNgaagcaggctctctgtggggagcccgatgtgggactcgatgcctgggccccaatcacactctgagccaaaggcaaatactcacccactgacccactcaggtgcccctataccagcaattagaacactaggcttgtccttacacctatttt
373-G7 S Forward 23 304 catctgctggcacaacttc tgcatcctattagatttcactttc catctgctggcacaacttcctcttgctctggggaggtcagttttttctgttttagtcaaactcttcaactgattagatgaggtccacctgcattatgaagggatatctgctttaNNNNNNNNNNNactgatttgaattccaaaacaccttcacaaaaaacattccaaatgttgtttgagcaaatatctgggcaccatggtccagtcaggttgacacaaaattaacagtcacaccactatgagtcctgtgtatccatattatttctttaagctacgtttatgaaagtgaaatctaataggatgca
373-I16 T7 Forward 2 342 tattgagcccaactgtataccc atctggttcccatgacacag tattgagcccaactgtatacccgagcctgcgcttggtgctgagggggtagtggtggcaacactgagcctttaccatccactccaccgcactcacagtgagatgaggatcagcacataaacccgggattccagcgtgggacacgctgagacagaaggcaacctgaggcagacggggggttagggtgggtgggacaggcagccatgaNNNNNNggacNNNNNtcaNNNNNNatgaNNaNNagacacagatcNNNNgttNgaNNagagagggtcattcNNNNNggcaggagcagcgcgtgcaaaNNNgccatgatgcccagNNtgctgtgtcatgggaaccagat
373-K10 T7 Forward 34 357 caaatgttaaatggacatctgc tgatagaggcctgagaaagaac caaatgttaaatggacatctgcNNNNNNNNNNNctgcacNNggctaNNNNNNgNNggNNNgaaaNNNNctttgtcttcatgNNNttggNNNNNNNtcaNNNNNNgagcNNNNNcgtgccaNNNNNNNNNNNNNgtgaataatttaatgtctgaatcagacatgattctgaacttctttgttttacagatgaggaaattgaacttatctgtgtctgcttcaaccccaggatttccttattctttgattcaaaacttgacctaaataatcctgtagaaNNatagagaaaagggtcgtcgaaatgctcgtgatacggaaatgagagtctgattgtcatgttctttctcaggcctctatca

Note: The column "Which Primer Resequenced From" refers to which of the BAC-end primers (Forward, Reverse or both) was used to resequence the 75 SNPs found in 120 dogs representing 60 breeds.

N's in the "Sequence (including primers)" column are basecalls that received a Phred score less than 20.