Skip Navigation National Human Genome Research Institute National Human Genome Research Institute National Human Genome Research Institute National Institutes of Health
   
Home | About NHGRI | Newsroom | Staff Directory
Research Grants Health Policy & Ethics Educational Resources Careers & Training

Intramural Research>Online Research Resources>NHGRI Dog Genome Project


- 1 Mb RH Map
- Breen 2001 Map
- Map History
*   Mellersh 1997
*   Neff 1999
*   Werner 1999
*   Mellersh 2000
- Supplemental Info for Recent Publications
- Protocols
- References
- Links
- Info for Owners


Print-friendly Page


Mellersh et. al. 2000: The First Integrated Linkage and Radiation Hybrid Map

The first integrated map merged the Werner et. al. 1999 linkage map of 341 markers with an expanded RH map of 600 markers, including markers that made up the first canine RH map (Priat et al., A Whole-Genome Radiation Hybrid Map of the Dog Genome (1998), Genomics 54, 361-378). The RH and linkage maps were integrated through the duplicate typing of 217 markers positioned on both maps. This process associated virtually all the RH groups with specific canine chromosomes or linkage groups, and generated an integrated map of 724 unique markers.

Approximately two thirds of the markers are polymorphic microsatellites and one third are genes; thus the map was suitable for both linkage analysis and comparative mapping studies. The integrated map provided the means for candidate gene studies to begin for initial linkages deduced from the linkage map by selecting appropriate candidate genes from the corresponding regions of the well-developed mouse and human maps.

The map was a collaboration between

  • Dr Elaine Ostrander's lab, previously at the Fred Hutchinson Cancer Research Center and now at the National Institutes of Health
     
  • Dr Francis Galibert's lab at the Universite Renne 1, France (Web site)
     
  • Dr Donald Patterson's lab at the University of Pennsylvania

This work was published in the journal Mammalian Genome. The reference for this paper is:

Mellersh CS*, Hitte C*, Richman M, Vignaux F., Priat C., Jouquand S., Werner P., Andre C., DeRose S., Patterson D.F., Ostrander E.A. and Galibert F. (2000). An Integrated Linkage-Radiation Hybrid Map of the Canine Genome. Mammalian Genome 11 120-130

Linkage Group to Integrated Group Conversion

Integration of the linkage and radiation hybrid map assigned some anonymous linkage groups in the Werner map to canine chromosomes, and most others are now in combined linkage/RH groups. These changes are shown in the table below.
 
Werner
Linkage
Group
Integrated
Map
Group
1 CFA7
2 S1
3 S4
4 CFA12
5 S9
6 S10
7 S7
8 S8
9 S11
10 S17
11 S12
12 S6
13 S2
14 S3
15 S14
16 CFA29-35
17 CFA13/19
18 S5
19 CFA30
20 S15
21 S16
22 S17
23 Linkage Gp 1

 

 
View Maps of individual linkage groups


DogHome


Genome.gov privacy policyPrivacy Genome.gov contact informationContact Genome.gov accessibility informationAccessibility Genome.gov site indexSite Index Genome.gov staff directoryStaff Directory Genome.gov home pageHome Government Links Department of Health and Human Services FirstGov National Institutes of Health