HomeCanine Chromosome Y (Guyon et. al. 2003)
| Marker_Name | Marker_Type | Chromosome | Position_Number | Position_TSPunits | Position_Mb | Forward_Primer | Reverse_Primer | Product_Size | HET | PIC | Accession_Number | References |
| REN197E16 | Microsatellite | cfaY | 1 | 0 | 0 | TGGGTGTGAGTCATCCAAGA | CGTTACTGTATGCTTAAGCTTTTGA | 140 | NA | 0.46 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| REN147N10 | Microsatellite | cfaY | 2 | 142 | 2.3 | ATTGGACCTTCACATGAGGC | TGGAAGCTGGGTCTAGAGGA | 364 | NA | 0.42 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| REN44K10 | Microsatellite | cfaY | 3 | 330 | 5.2 | CATATTGGACCTTCACAT | TTAACGCACAACTTCATC | 212 | NA | 0.73 | AJ391641 | Jouquand*, Priat* et al., 2000 (Animal Genetics 31, 266-272) |
| DGN6 | NA | cfaY | 4 | 419 | 6.7 | NA | NA | NA | NA | NA | NA | NA |
| SRY | Gene | cfaY | 6 | 922 | 14.6 | GAACGCATTCTTGGTGTGGTCTC | GGCCATTTTTCGGCTTCTGTAAG | 132 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| AF005414 | SNP | cfaY | 7 | 997 | 15.8 | GTCCTGGGTTCTCCATTGTGTTCC | GTCCTGGGTTGCAGGGTTGGTTCA | 990 | NA | NA | NA | Olivier & Lust, 1998 (Animal Genetics 29, 146-149) |
| AF005413 | SNP | cfaY | 8 | 1347 | 21.4 | GTCCTGGGTTCGGGTTAGTGTTAG | GTCCTGGGTTGAAGCCCTACATTG | 650 | NA | NA | NA | Olivier & Lust, 1998 (Animal Genetics 29, 146-149) |
| AF192268 | Microsatellite | cfaY | 9 | 1468 | 23.3 | GCCCTGGAAGTGTATATTCCTCTAA | TCTGAAGCTTCTTGTTATGTGTCAG | 208 | NA | NA | NA | NA |
| BAC_373-G16 | BAC | cfaY | 10 | 1714 | 27.2 | ATATGTATCCAAGGGAAGACTGGA | GGAGGGTAGAGGGAAAGTTAGAAG | 185 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |