Canine Chromosome X (Guyon et. al. 2003)

Marker_Name Marker_Type Chromosome Position_Number Position_TSPunits Position_Mb Forward_Primer Reverse_Primer Product_Size HET PIC Accession_Number References
BAC_382-G14 BAC cfaX 1 0 0 CATCAAATCCCAAGTAAGGAAG AAACAGCTCTGTATCCTGATGG 347 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST11F3 EST cfaX 1 0 0 AGAGAAATTACACTGGCAACAATTC AATCGAATAGCATTAGGTTGATCTG 192 NA NA AJ537363 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
RAB9A Gene cfaX 2 350 9.2 TTCCCTGTGCGATCTAACCAACTTA GATGTGTCCTTCTCCCACCCC 150 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN230I20 Microsatellite cfaX 3 402 10.6 CACTTAGCAGAGCACCCTCA CCAGGTTCACTGCAGCACTA 217 NA 0.72 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
PDHA1 Gene cfaX 4 440 11.6 ATAACCGCTACGGAATGGGAACG GGGAGGGCGGCATACACGGAAAGGG 269 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST11E11 EST cfaX 5 790 20.8 TGAACAACCTACAACTAGGAGGACT ATGATTCAAAGGAAAAACAAACAAA 197 NA NA AJ537362 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
C00304 Microsatellite cfaX 6 879 23.1 GCACCACTTGTAACCCTTGAAC TCGCATAGGATGATGAATAATA 181 NA NA NA Yuzbasiyan-Gurkan et al., web site
REN101G16 Microsatellite cfaX 7 959 25.2 AGACATGTGAACCTGCATG TATCATCTCACTCTGGCACA 145 NA 0.66 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_374-A19 BAC cfaX 8 998 26.3 ATGCATACTTTGCAACGATTAG TCACTTTGCAGCTTGACATAAC 114 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH3997 Microsatellite cfaX 9 1108 29.2 GTGGATGCAGTGTTGATATTTG TCACTTCACTTGACTTGGTTTG 350 0.89 0.89 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH2985 Microsatellite cfaX 10 1188 31.3 AGGGGCAACTCAAAGGTTAC ATGTGTGGAACTGAGCTTGG 311 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH3079 Microsatellite cfaX 10 1188 31.3 AAAAGGATGCTTCCAGTTCC CCTTATTTTGGAGGGTCTGC 199 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_376-P3 BAC cfaX 11 1228 32.3 CTCTTAACTAATGCCTTGTCGG ATAACCATTTCCTTGTGAGTGG 141 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
DMD Gene cfaX 12 1281 33.7 TGGAGCCGAGCACACAGC CCAAGAGTAGAGTTCCTTTGCCACA 144 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH2548 Microsatellite cfaX 13 1303 34.3 AAGGGAGGAAACAATGCTGA GACATTCAGAGATTTCCGCC 175 0.8 0.77 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_375-K19 BAC cfaX 14 1325 34.9 AAGATGACAACTGAAACATCCC GTAGGAACGAAATCATGAGACC 127 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BCMP1 Gene cfaX 15 1365 35.9 TCTGGAGTGAACTAATGGGCTAA GCAGTCTGAGATTAGTGGCAAA 137 NA NA AJ243320 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_385-G21 BAC cfaX 16 1388 36.5 CATGGTTGTAGTCCGGTTTATAG CAAAAGAAGCAAAGAAGACTAGC 377 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
CUX30001 NA cfaX 17 1411 37.1 NA NA NA NA NA NA NA
CUX40002 NA cfaX 18 1491 39.2 NA NA NA NA NA NA NA
FH2916 Microsatellite cfaX 19 1560 41.1 CTGGCATACCTCAACAAAGC CAAAATTGTGGACCTAAAATCG 227 0.84 0.83 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH2997 Microsatellite cfaX 20 1583 41.7 TCTCTCATCTCTCCCTCTGC AAAAACTGACATCAACAAATGC 226 0.85 0.84 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN172J16 Microsatellite cfaX 21 1653 43.5 ACGCTCTGCCTACACAGTGA GCAGTCTGGGAAAAGTCTGG 219 NA 0 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH1020 Microsatellite cfaX 22 1694 44.6 TCTACAATGTCAGTGGAAAGC CACAGTGGGGAGTAGACAGC 265 0.68 0.62 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
USP11 Gene cfaX 23 1763 46.4 TGCTCTCTTCCTTCCCACATCC ACACTGCCGGGAGGAGACAC 164 NA NA L03387 Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH1024 Microsatellite cfaX 24 1924 50.6 TCCTCCAGAGAAACAGAACC TGGACACATGGAGACATTAGG 392 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
SYN1 Gene cfaX 25 1992 52.4 ACACCGTCCCCTCTACCTCT TGGGAAGAGTCCTAGGCAGA 291 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH3027 Microsatellite cfaX 26 2048 53.9 GTTTCCTCACATGCAAAAGC GCTGGAGGTCAAGGATAAGG 212 0.85 0.83 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_381-F8 BAC cfaX 26 2048 53.9 CTCCTCTCCTAGGCCATATACC TAGTAGGCTCCAGGCCAGTC 318 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN296K08 Microsatellite cfaX 27 2104 55.4 TTCTTGGTTAAGGCCCTATCAT CCTCTGCCTATGTCTCTGCC 154 NA 0.42 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_372-I20 BAC cfaX 28 2127 56 GTTAGTGCAGTTTCTTTTTGCCTT ATACCAACCCTATGGGATTACAGA 193 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
ALAS2 Gene cfaX 29 2244 59.1 GATAAGCAGAGGTCTGGGAAAGGAA CTTACCTGGAGATAATGGGGGGAG 139 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_381-P8 BAC cfaX 30 2360 62.1 ACACACTGGCCTTGCTTG GTGGGAAGCACCTATAAATGAC 301 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST8D8 EST cfaX 31 2444 64.3 CTGAATCAAGTGAATAGTTGCTGAA TTAATGCTTTCTCATTGATTGTTGA 138 NA NA AJ537367 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_375-C10 BAC cfaX 32 2556 67.3 TTATTTCTTTAGTGGTGCGTTCTTC AGGGGAAGAACAAGTTACTGACTG 200 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
AR Gene cfaX 33 2645 69.6 CAGCAGCAGCAGCAGGAGAC TCCAGGCTCTGGAACGCAG 186 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
D04614   cfaX 34 2995 78.8 ATCAAGTCCCACATCGGGCT GTGGTTCTTATCCTTTCTCTTATC 154 NA NA NA Yuzbasiyan-Gurkan et al., web site
EST15G11 EST cfaX 35 3345 88 ACAATTGCTGAACAGAGAAAGTAGC AGGAGGATCTGGTAGAAGACTTTGT 200 NA NA AJ537364 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN185C11 Microsatellite cfaX 36 3424 90.1 CTCAACTGACTGAGCCACCA ATTAGCAGGTCCAGGGAAGG 289 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
ATP7A Gene cfaX 37 3447 90.7 TAATAAACATTGATGGCATGACTTG TGCAAGAGATACTCGTATGGATTTT 101 NA NA AY011436 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
PGK1 Gene,Microsatellite cfaX 38 3797 99.9 AATATTTTTCATGTATAGCACTCC ATGCTCCCTTCAGTTCTTTCC 183 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN307M14 Microsatellite cfaX 39 3849 101.3 TCTCTAGCTCCATCCCTGTCA CCTCCAGGTTTATAGCAGCA 195 NA 0.5 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_375-O19 BAC cfaX 40 4199 110.5 AACACTATGTTGAATAAGGGGTGAG TTTTACAAGGAACAACATTCATTCA 198 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_373-E4 BAC cfaX 41 4219 111 CACATAAATGTAGACGAGAACCCA GCATTTGTGTCAGTTGATTTTCTT 184 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
CHM Gene,Microsatellite cfaX 42 4239 111.6 GGGAAGGTGGCAGTAGCAAGG CAGAGACTAATGAGGGGGCTCC 172 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN130F03 Microsatellite cfaX 43 4269 112.3 ATCGAGTCCCACATCAA TTCTACTTCAGCCCCTACC 181 NA 0.58 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN143I17 Microsatellite cfaX 44 4299 113.1 GTATCTGACCCATTGGGGTG GGAGTCTTCAACAGAGGGTCA 204 NA 0.48 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_381-P2 BAC cfaX 45 4339 114.2 GCCAGTGAAAAGAACAAAGAAG GGCAAATAGTTACAGCAGTGG 315 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_385-H23 BAC cfaX 46 4359 114.7 TGACAGGATTATGGTTTTAGGC CCTAAATTAAGTGCCTCAGGTG 311 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH2584 Microsatellite cfaX 47 4390 115.5 GTTAGGTTCACAGTGGGCGT ACTCAAAGACCTGGAGGGGT 308 0.87 0.86 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN75A05 Microsatellite cfaX 47 4390 115.5 TCTGTTTTTATGCCACTACTA TTTAATGCAATCCCCACAAT 241 NA 0.18 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_381-A6 BAC,Microsatellite cfaX 48 4740 124.7 CAAGTAATTCCCTGTGCGTAAG CTCCCATCAGAAAATTCACAG 429 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
F9 Gene cfaX 49 5090 133.9 ACATCAACTCCTGCGTCTCATCC GCCACCAGTACATCCTTCTCCACT 221 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
EST16E3-B EST cfaX 50 5128 134.9 CTCTGCTTCCTGTCCCCTTG GGGATGGCAGCAAATTCATC 102 NA NA AJ537365 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN144O22 Microsatellite cfaX 51 5165 135.9 GAGGCTTGTTTTGTTGGGAA GGGCAGAAGTTTTTGACCCA 206 NA 0.64 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
CFOR16B11 Gene cfaX 51 5165 135.9 CTTGTTTCTAGAACTGGACAATG AAGCTTTAGCAATGCGTAGAGT 247 NA NA AJ431528 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
F8 NA cfaX 51 5165 135.9 NA NA NA NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
GDI1 Gene cfaX 52 5515 145.1 CACTTCGAGACAACCTGCAA GTCATTCTGTTTGCGCTTCA 100 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)

 

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