Canine Chromosome 30 (Guyon et. al. 2003)

Marker_Name Marker_Type Chromosome Position_Number Position_TSPunits Position_Mb Forward_Primer Reverse_Primer Product_Size HET PIC Accession_Number References
ACTC Gene cfa30 1 0 0 ATTAAGGAGCCCTTGAGTTAAAAGA GTCAGTGTGTCATCTTTGTCGTATC 132 NA NA AF203019 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN187M05 Microsatellite cfa30 2 116 1.5 GCAGCCACAAATACCAAGTG GTCCCATTCTGCTCCCTCTT 332 NA 0.18 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH3489 Microsatellite cfa30 3 230 2.9 GGCCACGAATGCTATTTACC TCCTCATATGTCCTCAACTGC 278 0.8 0.79 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
CPH1 Microsatellite cfa30 4 342 4.3 GCCTAGCCCAGTGAAAGTTAC TTCCAATGCCTGATAACTGAGA 135-144 NA NA NA Fredholm & Wintero, 1995 (Mammalian Genome 6, 11-18)
DTR30.30 Microsatellite cfa30 5 416 5.2 CGCTGGATGGTAATCAGATA GCTCTAGCCAGTGTTCTTGT 301 NA NA AJ279981 Tiret et. al., Mam. Genome 11, 703-705 (2000)
FH3761 Microsatellite cfa30 6 540 6.8 GCTGAGAGAGTCAGGAAAAGC AATAAGGCTGGTGTGAAAGG 203 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN103E21 Microsatellite cfa30 7 614 7.7 ACCCTGTAGTTCCATCCAT ACTGCAGCCTTATTCACAA 184 NA 0.48 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH2050 Microsatellite cfa30 8 714 8.9 GTATCGAGTCCCGCGTTG CTGGGAGGTGCAAGGTTTAA 258 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_381-L8 BAC cfa30 9 756 9.5 CTCACTTTGGGAACATAGCTG AAGGATAAATGGGACACCTTG 225 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN240E16 Microsatellite cfa30 10 898 11.2 AGATATGCAGGCGTACCCAC GTGAGGGCTCTTTCGTCTTG 168 NA 0.62 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN51C16 Microsatellite cfa30 11 957 12 CAGTTCATCCTTCCCCCTCTC GTGCTAGTCTGGCTGTGCTCA 258 NA 0.8 NA Mellersh et al., 2000 (Mammalian Genome 11, 120-130)
REN292B07 Microsatellite cfa30 12 999 12.5 ATTTGAGGGGAGGATGGAAC TCCTAGTTAACCTAAGCCACCAA 277 NA 0.62 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_381-L11 BAC cfa30 13 1072 13.4 GAAATGGACAAATCCCTAGAAAGAC GGGAAGAATTTGTGAAGTATTGATG 199 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_381-C6 BAC cfa30 14 1183 14.8 GAAACAGTAGTGATTTCCCTAACCA AAAGGAATCACTCCAGACAACACT 184 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN89K14 Microsatellite cfa30 15 1292 16.2 TTTGGGGCAGGGAGAGTGG CCCCTGCAGCAAATGTGGTT 234 NA 0.58 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
DUOX1 Gene cfa30 16 1334 16.7 AGCCTCCTAGTCTAACAGCACAAT GCCTGAGAGCACTACAAAGAGATA 101 NA NA AF230497 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
DUOX2 Gene cfa30 16 1334 16.7 ATGCTCTGAGAAGGTGGAGAAG CAAATGCTGAGTCCAATACCAA 202 NA NA AF230498 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_381-K15 BAC cfa30 17 1444 18.1 GCTCATTTGCCAAAACTAAGTC TGTGATTTTGAAGAGGTTAGGC 141 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_382-G12 BAC cfa30 18 1531 19.1 GGTACAAAATTAATACCCAGAAATTG GGAAGGAGTAATAGCCTTTTCAG 376 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
C02806 Microsatellite cfa30 19 1695 21.2 TCCCTCCTCCTGTGTCTCT CTACACCTGTGAAACTACCA 159 NA NA NA Yuzbasiyan-Gurkan et al., web site
BAC_373-I9 BAC cfa30 20 1782 22.3 GGTGTATATCGGGAGGTAGGTGTAT TTAGCAGGAAAAGTAAGGGAAGATT 199 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_382-A4 BAC cfa30 21 1856 23.2 GCTACAATCCCACTTACCAAAC CCCACCTAATTAGCAGAAATCC 360 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FBN1 Gene cfa30 22 1954 24.4 TGATGACTCAGAGCCTCCCT CATGGCAAGAAGTCCCTCAT 141 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
EST7C5 EST cfa30 23 2063 25.8 CAAAAATAGGACTCAGGTCTTGAAA CTATTGACTTGGGTTTCATCCTAGA 218 NA NA AJ537301 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN248F14 Microsatellite cfa30 24 2204 27.6 CACCTTCGTCTTGTGCAGTT ACTAGGCAGGGTGAGCTGAA 212 NA 0.7 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
STS173M16 SNP,STS cfa30 25 2302 28.8 GGATGCTATTGAAAGAACACTGACT TGAACCACTACTGTCATTACCTCAA 352 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST28C7-B EST cfa30 26 2410 30.1 AACATTCTGCTTCCTGATATAGTGG AACAGAAGAGGATCACAGCTATTTG 97 NA NA AJ537300 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH2290 Microsatellite cfa30 27 2467 30.8 GGCTTGAATGATCTAGCCCA TGGCTACTGTCGCTATCACCT 590 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN105I08 Microsatellite cfa30 28 2587 32.3 TCTTAAGAAAATGCCCACCTG CAGAACAGCGTCTGAGAGCA 196 NA 0.5 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_374-C13 BAC cfa30 29 2706 33.8 ACTGGAGCAGTCAGGAAAGAGTAG CCAAATTTCCCCAGTAGTAGTGAT 182 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST10E8 EST cfa30 30 2763 34.5 ATTCTAAGGCTTTTTGGAAAGAACT ATAGGAATTTAAGGCCTTCTGTTGT 191 NA NA AJ537294 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST27D12 EST cfa30 31 2871 35.9 ATGAGCTTCAGAACACTTGTAGGAC TCCATGATACCCACATATTCAAAGT 155 NA NA AJ537298 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_376-C17 BAC,Microsatellite cfa30 32 2956 37 TGATAGGACTGGCACATAACAG ATTTAAAGGAGGGAAAGATTGC 398 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN50N18 Microsatellite cfa30 33 3028 37.9 CAGGAATCTGGTGTATGTG TCCCTGGCCATTTCCTCAT 214 NA 0.44 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
RAB11A Gene cfa30 34 3113 38.9 CCACTGAAAACAAGCCAAAGGTG CATTCGGGACAAGTGGATGATTTTA 220 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH3632 Microsatellite cfa30 35 3171 39.6 AGCTCCCCTACCATTCTCC GGCTTAAAATGACAAACATTAGC 238 0.91 0.9 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_385-O23 BAC cfa30 36 3256 40.7 GTGTTACCAAAATCTGGCTCTG CTACTGTGTACAAGACACCATGC 320 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
STS182B11 SNP,STS cfa30 37 3328 41.6 CTTCGGCATTGATTTCAGAGTATTA AAAACAAAAACATCCCTTTAGAACC 349 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST20D2 EST cfa30 38 3370 42.1 AATGATGCACATAGGCAATACAATA CTGGTTGTTGATAGAACAAGTTTCC 200 NA NA AJ537295 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH3950 Microsatellite cfa30 39 3394 42.4 ACTGGCTTAAAACTCAAGTGC GCCACTGACTGGATGTACC 270 0.89 0.88 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN245M07 Microsatellite cfa30 39 3394 42.4 TCTGTGGAGAAACCTTGCCT GCAACTATAGCCCTGTGGGA 227 NA 0.46 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
AHTH134REN STS cfa30 40 3452 43.2 CCCGTCCTTAACCACATGAT AGCTGGTGACCCAGGTAGTG 167 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH3053 Microsatellite cfa30 41 3549 44.4 GATTAAAAGGGCAAGCAACC TCATCTCCAGCTTTTCATGG 193 0.75 0.74 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
UACA Gene cfa30 41 3549 44.4 TGCAGACACACTTTCTTGCC TTTCTTGTCTCGCTCCGTTT NA NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
LEI-1F11 Microsatellite cfa30 42 3606 45.1 TTTCAGAGTTCTGATGCTCC GTCAGTTCAATTAGCCAGAG 175 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
EST25G10 EST cfa30 43 3629 45.4 CAGAGATACTCCTTTGTAGAATTTCC AACAAGAGAGATGATCCCCAAC 117 NA NA AJ537297 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
CYP1A1 Gene cfa30 44 3670 45.9 GAGCCTGGAAGAAAGACCG CTCAAAGGCGAAGCGAAAC 191 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
EST7E12 EST cfa30 45 3740 46.8 TGTTTACCAATGACCTTTTCCTTAG AGGCTGTGTTTCCTACCCTACAC 234 NA NA AJ537302 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)

 

 

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