Canine Chromosome 29 (Guyon et. al. 2003)

Marker_Name Marker_Type Chromosome Position_Number Position_TSPunits Position_Mb Forward_Primer Reverse_Primer Product_Size HET PIC Accession_Number References
REN252J07 Microsatellite cfa29 1 0 0 GCCCTCAGAAGCCTCTCTCT AAGCCAGCACATAAAATGGC 354 NA 0.42 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_385-D19 BAC cfa29 2 175 1.8 CCTAATTTTGTGGACTGTGGTC CAGGAGGAATAGCACAGAGAAG 447 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH2952 Microsatellite cfa29 3 200 2 AAAGGCATGATCCTCAGAGA CCAGCTCTTGGTTTCATCAT 371 0.89 0.88 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH2609 Microsatellite cfa29 4 244 2.5 TATATTGCTTTGGCCTAAAGGA GGAGTTGAAATGGAAAGAAAGA 336 0.9 0.89 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
EST19G4 EST cfa29 5 382 3.9 AAGTCTTGCCATTGAATCTACCAG GAACATTTTGCATTTCTTCATTCTT 143 NA NA AJ537292 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN239K24 Microsatellite cfa29 6 497 5 TTCATTGGCTGGTGACTTTG CCCCAGGACCATTTGTTAGA 307 NA 0.78 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
STS38E18 SNP,STS cfa29 7 586 5.9 TACCCCAACAGTGTGAAGTTAGAAT AGCACTAAAGAAACCATCAAATCAC 629 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH2364 Microsatellite cfa29 8 740 7.5 TTTCTGTCGAAATCAATGTTTAGG CCCTTCAGGCTCAAACACTC 510 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
DINRA2 Microsatellite cfa29 9 873 8.8 GTCTGACTATTCCCAAGTAGC CCTAGAAATGGCAGATAACAC 325 NA NA NA Mariat et al., 1996 (Animal Genetics 27, 433-442)
FH3443 Microsatellite cfa29 10 1076 10.9 CCTTGGCCAAAAACAATG GAGGAGCAGCAATTTGTCAC 354 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH3878 Microsatellite cfa29 11 1247 12.6 TACCTCAGACAAGCCGAAGG TGTCTTGACATTCTGCAAGC 367 0.74 0.72 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN170M10 Microsatellite cfa29 12 1334 13.5 GCTTTGGCAAGACAGAGTCC ATTTCGGTCATTCTTCCTGG 291 NA 0.61 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_376-A15 BAC cfa29 13 1392 14.1 CCTGTCATGCAATACATGCTTAATA GTCAACAGATTTCAATGTTTTTGTG 207 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
ASPH Gene cfa29 14 1490 15.1 CTGAAAGCTCTAATACCATCATC ACATTTATCTGGATACATGATCAA 183 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
C05302 Microsatellite cfa29 15 1597 16.1 GAGCCTGCTTCTCCCTCTG CCAGGATTTGGAAGGTTCT 178 NA NA NA Yuzbasiyan-Gurkan et al., web site
REN251L21 Microsatellite cfa29 16 1735 17.5 AGCCCACTAAAGGCACAGAA GGGAATGAGACTGAAAAACAAA 320 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN52D08 Microsatellite cfa29 17 1793 18.1 CAAAAGGAACCAGACATG GTGTGTTTTTCTGCTTCTC 167 NA 0.6 NA Mellersh et al., 2000 (Mammalian Genome 11, 120-130)
REN263H24 Microsatellite cfa29 18 1851 18.7 CTGTCCAGCTCTCTCTCGCT CTTGCAGTTGCTGTTCCAAA 229 NA 0.48 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
AHTK40 Microsatellite cfa29 19 1950 19.7 TAACGTGCTGGTTTTAGACTGATC CACATGGAGCCTGCTTCTC 221 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH2328 Microsatellite cfa29 20 2114 21.4 ACCAGGTAGTTTTCAGAAATGC AGTTATGGGACTTGAGGCTG 189 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN165M10 Microsatellite cfa29 21 2262 22.8 AACAGCCAAATCATGGAAGC AGCACCTCCATCCTTTCCTT 180 NA 0.76 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
C29.188 Microsatellite cfa29 22 2373 24 TCTGTGACTTTCTCTCAAATGG TCCCTCTCCCTTCCTCTCTC 132 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
STS246A16 SNP,STS cfa29 23 2504 25.3 ATACAGACATCCATCTATCCCAAAA TTGCTAGTTCCAAGTCAACACATAA 453 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_382-G19 BAC cfa29 24 2622 26.5 TTGGTCTCATGACTATGGCAG TCAAAGAATGTACTGCAGGTTG 307 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_416-N2 BAC cfa29 25 2663 26.9 CTTCAAACCTAGCCAAATTCAG GTAAGGAATGAACGCTTCTCAG 419 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH4066 Microsatellite cfa29 26 2771 28 TGCATGCAGTGTATTACTGAGC TTTGCCAATATATTTACCCTGG 481 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN45F03 Microsatellite cfa29 27 2869 29 CTGGAAGTTGAGAAGTAGGAG TGTGATGGTATTTAGAGGTGA 274 NA 0.72 AJ391647 AJ391648 Jouquand*, Priat* et al., 2000 (Animal Genetics 31, 266-272)
CPH9 Microsatellite cfa29 28 2990 30.2 CAGAGACTGCCACTTTAAACACAC AAAGTTCTCAAATACCATTGTGTTACA 139-153 NA NA NA Fredholm & Wintero, 1995 (Mammalian Genome 6, 11-18)
REN164F23 Microsatellite cfa29 29 3075 31.1 GGAGGTGAAAGTGCAATGCT GGGAACAGTGGTTACGAGGA 302 NA 0.76 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH3582 Microsatellite cfa29 30 3146 31.8 ATGAAAGCTTCTTGACTTCCTG GCAAGCCTAGAATTCTTCAAAC 455 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_376-C7 BAC cfa29 31 3217 32.5 CTAGGTGTAGTTCTGGGGTCTG AATGAACAGTATCTGGAGTGGG 201 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
STS189F10 SNP,STS cfa29 32 3301 33.3 TGATATAAGCCACCCAGTCTACAGT GCTATTATTTGCTTTCTTCATTCCA 445 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
IMPA1 Gene cfa29 33 3342 33.8 CATTTTAAATGGAGTCGATACTGA GAAACAGAAATGGTTTAAGACATTCA NA NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_372-E20 BAC cfa29 34 3365 34 AATTCTAACTGTTGCGCTATTTAAC GAGTGGATAGGAGAGACAGCAC 214 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH3003 Microsatellite cfa29 35 3422 34.6 TTCCCTCTAGTATTTGGTCTGC TCCTCCCTCCCTACTGTCTC 313 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
TRAM Gene cfa29 36 3505 35.4 CCCATCTTTAATTGAGAAGCATTTA TACTGTGAAGACAACAAAAAAACCA 185 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN86C11 Microsatellite cfa29 37 3611 36.5 CCACACTGAGGTTACTTA GTGGGTGGTGGAAATGG 227 NA 0.6 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH2385 Microsatellite cfa29 38 3652 36.9 AGTTCCCTTTATTCTTCCAAAGTG GATGAATCACTAATTCTATTCCCG 520 0.89 0.87 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN128M05 Microsatellite cfa29 39 3736 37.7 GTCATTGGAGGCTTTTAGTTT TTCCCATCCTTATCTTCTTTC 219 NA 0.34 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH2772 Microsatellite cfa29 40 3821 38.6 CCCAAAGCACATCCTAATTC GGAGTCTGCTTCTCCCTTTC 168 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN169O18 Microsatellite cfa29 41 3845 38.8 CACCCAACCTGTCTGTTCCT ACTGTGTGAGCCAATCCCTT 165 NA 0.68 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_382-E23 BAC cfa29 42 3887 39.3 GGCATAAAATGGATATGGTCTC CTGAGGTTGTACCAGAAGAATC 392 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
C29.002 Microsatellite cfa29 43 3911 39.5 TATTAAATCCCAGTCACCACCC AGGTCCCAGACCGAGTCC 208 NA 0.65 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_373-C7 BAC cfa29 44 3968 40.1 ATTGATCTTTTCATTTTCCCTGAG GAAGTCATTCAATTGGAAACAATG 235 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH3366 Microsatellite cfa29 45 4086 41.3 AAGGGCTCAGTCATCCTACC CCCAGAAATCTGCTTTTACC 377 0.35 0.34 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST5B10 EST cfa29 46 4158 42 GGAGTTCTGTACATTTTATTCAGCAA AAAAGCATTTCCTATCAAGCATTTA 126 NA NA AJ537293 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_385-E23 BAC cfa29 47 4230 42.7 GCTTGTGAATCACCCAAATC AATCACTCTAACACCCCTAACG 306 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH2177 Microsatellite cfa29 48 4302 43.5 CCTCAGAAAATGTATGCTGGG TATAGGGCATCTGGGTGGC 470 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH3082 Microsatellite cfa29 49 4359 44 AGTAAAGGGTTCTCAAGTGTGC CATTTGTCATTGTGGAAAACC 216 0.57 0.54 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
DTR29.21 Microsatellite cfa29 50 4443 44.9 TGGAGCTTCTAACTTTCAGC ATTTCCTCCTAAAGGCTCTG 238 NA NA AJ279972 Tiret et. al., Mam. Genome 11, 703-705 (2000)
FH1007 Microsatellite cfa29 51 4569 46.2 CAATTTCCAGTTCTATGTGTGG TGAAAATGTTTGGGTGATCC 347 0.45 0.38 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
AHTH235REN STS cfa29 52 4706 47.5 GCCTGCTTCACAAAATGACA GGCAAGTTTCCTGAGCTGAC 172 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN74A15 Microsatellite cfa29 53 4764 48.1 GAGCCCGATGGAGGACT TAGCGACAGGGATACACAAA 209 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN187J21 Microsatellite cfa29 54 4821 48.7 AAAAGCCCAAAGATGACCCT CTCTCTCTCCTTTGGCCCTT 186 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
CFOR16H04 Gene cfa29 55 4906 49.6 AGCCCCTGCATTATACAACG AACTGAAGTAGTGAGCACAGACACC 458 NA NA AJ431546 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
STS45F09 SNP,STS cfa29 56 5015 50.7 ACTTCAAGCAGCTCTCCATTCTCTA CAAGAGAGTTTCAAAGACATCATCA 428 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN01C15 Microsatellite cfa29 57 5073 51.2 GATGATTAAGGGGCTGAGT TCTTGGGATCTGCGAGTAT 368 NA 0 AJ391532 AJ391533 Jouquand*, Priat* et al., 2000 (Animal Genetics 31, 266-272)

 

 

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