Canine Chromosome 28 (Guyon et. al. 2003)

Marker_Name Marker_Type Chromosome Position_Number Position_TSPunits Position_Mb Forward_Primer Reverse_Primer Product_Size HET PIC Accession_Number References
C28.176 Microsatellite cfa28 1 0 0 TCAGGCTCTCCAGAGACACA TTGCCAATAGCAGACTGTGG 186 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH2759 Microsatellite cfa28 2 224 2.7 AGTACTTGAGGCTTGGAGTCAG CAAGCTGAGAGCCATGTAGG 197 0.74 0.71 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
DOPRH07 Gene cfa28 3 402 4.8 TTATCCTTCTGTGGCCCCTA TCCCTAGCTGATGGGAGTTG 203 NA NA X64966 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
AHTH197REN STS cfa28 4 476 5.7 CGAGGGGCCTAAAATCTAGC GGCAGGACCCCAAATTAGAT 156 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_382-A20 BAC cfa28 5 577 6.9 GTTTCCAAGGAAAATTCCCTAC GAGCAGGTGGACAGTAAAGAAG 343 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN205C12 Microsatellite cfa28 6 723 8.6 TGTTCTCATCCCATGCTTCC TAGCTGCCTGATGGGGTAAC 142 NA 0.32 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
EST12F11 EST cfa28 7 823 9.8 GGTGTTTTTGATAGAATCCTGAAGA GGAAGAGAGCACTTTCAGAACTTAC 212 NA NA AJ537284 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_385-H17 BAC cfa28 8 966 11.5 ATCTCCCTCCTCCTTAATTTTG TTAAAGAAGAAAAGGCTGCTTG 423 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN147D22 Microsatellite cfa28 9 1053 12.5 TCAAAAGAGCAAGCCCAGAT TTGTCTTACGCAATTGCTTTTT 154 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH3963 Microsatellite cfa28 10 1077 12.8 CATGACCTTCTCAACTTTCTCC ACTCAAATAGCAATAACCCAGC 389 0.32 0.27 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_373-M21 BAC cfa28 11 1198 14.3 ATGTACTACGAACATTCCACAGGA TGTGATTCTAAACAAGCTCTCTGC 215 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST23A6 EST cfa28 12 1222 14.5 TACACATCCTTGTATACACCTTGGA CTTGAATGTCACAATATATGACCAA 116 NA NA AJ537287 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
DTR28.14 Microsatellite cfa28 13 1320 15.7 AGACACTGGAGCTTCTGTCA CAAGCCACACCAGAACAG 334 NA NA AJ237682 Tiret et. al., Animal Gen. 30, 462-473 (1999)
BAC_381-F20 BAC cfa28 14 1441 17.2 AGTTTATGGAATGATTTGAGGC TGCCCTCTATCAAGAATTAAACC 352 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH2758 Microsatellite cfa28 15 1483 17.7 CCATCAGAGGAGGGATTTG ATCCACTCTTCCCACTACCC 180 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_382-E5 BAC cfa28 16 1592 19 GTTATTGGAATGCTTTGGTCTC AGTGATCTGTGGAGAAGAGCTG 353 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN136E14 Microsatellite cfa28 17 1678 20 TAAAGCCCTGGACCCTATT TCCATGATTGGGAAGTATCTT 103 NA 0.42 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
D04504 Microsatellite cfa28 18 1720 20.5 GCAATCTATTAGTGGGGTCAT CTGACTCACAGCCTGAAATGTAT 224 NA NA NA Yuzbasiyan-Gurkan et al., web site
REN196N02 Microsatellite cfa28 19 1806 21.5 GCTGCATATCTGTTGGGGAT AGGAAGGGAGTCTGGGTTGT 320 NA 0 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
PAX2 NA cfa28 20 1877 22.3 NA NA NA NA NA NA NA
BAC_381-M21 BAC cfa28 21 1918 22.8 ATCATGATCTTCAACTGGAATGACT TCGTAACTTTGTTTCCTCCATCTAC 166 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
RBP4 Gene cfa28 22 2001 23.8 ACCACTGGATCATCGACACGG CCTGGCCAGGCACAGCTC 182 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH2208 Microsatellite cfa28 23 2095 24.9 ATGTCTGGCTCTGCGCTC AAACACTCCTGGGAGAGCAA 491 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
ACTR1A Gene cfa28 24 2211 26.3 ACCCCCTTAGGACTGGAGAA CAGTGGGTTCCTTGTCACCT 106 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST3H1 EST cfa28 25 2282 27.2 GCCACTGCTTCTGAAAGTAATAAAG GTGACAAAATAATGGGAAAACAGAC 116 NA NA AJ537290 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
COL17A1 Gene cfa28 26 2323 27.7 AAATGCACAACTACAACCATCG AGAGCAATGAGGCCAAAGAGTA 196 NA NA AF016649 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN258F18 Microsatellite cfa28 27 2346 27.9 AAACCTTTCCATGTGGGTCA CAAATTGCCAGAGTTGGTGA 316 NA 0.75 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_376-O7 BAC cfa28 28 2387 28.4 GGGGACTATCCTGAAAATGTAAGAT AATCTGCCTAAGCTCCTTCTCTAGT 195 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH2668 Microsatellite cfa28 29 2444 29.1 TCCACTTGGGAGTCGATTT TGGGAAAAGATGCAGAGAAG 345 0.86 0.85 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
C28.434 Microsatellite cfa28 30 2501 29.8 ATAGTTAAGGGCCTTGTGTACG ACAAGCACCTCCCCTTCC 104 NA 0.45 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
EST-CFZ97822 EST cfa28 31 2542 30.3 TAGCTGCCCAGGAGTGAAAC GGAGGCCTGGAATCTCATTT 159 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_375-O20 BAC cfa28 32 2638 31.4 TTAATGTGGTCTGATTGCTCTG AATAAGGGCCATTTATGACAAG 168 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH2922 Microsatellite cfa28 33 2710 32.3 GGTATGGTCCTTGGAGACC CAATTCTGTCATTTGGTTTGG 479 0.87 0.86 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH3033 Microsatellite cfa28 34 2795 33.3 CAAATCATGAACACACATAGCC GAAGACGTTCCAAATGTGTTG 219 0.77 0.75 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN74M16 Microsatellite cfa28 35 2961 35.3 ATAGGAAAAGCCATAAGC TTTTCTGCCCCTACTGTCATC 150 NA 0.62 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH2585 Microsatellite cfa28 36 3059 36.4 TCGATGTCTGCCTTTCTTGA GCCCCCTCACCTCATATTCT 306 0.87 0.86 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_382-K8 BAC cfa28 36 3059 36.4 GAAATGCATGATTCAGGTCC TACCAATGTGAGGAAAGGAAG 326 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH2785 Microsatellite cfa28 37 3117 37.1 ATGGCAGGTCAAGAGTATGG GATAGATCCAAGCCAACACC 316 0.48 0.46 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN207H12 Microsatellite cfa28 38 3255 38.8 ACCCCAACTACGCCTTTCTT CCAGCTTAGCCAAACTGAGG 286 NA 0 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
EST17B6 EST cfa28 39 3363 40 GAAGTGGTCAGGTTAAGTTGAAAGA AGAAAGACACTTTTGGGAAGAATTT 148 NA NA AJ537285 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
PNLIP Gene cfa28 40 3447 41 CTCAAACCAGGCTCTACTCATTCCA CTCCTCTCCCTTTTGCACGGT 153 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
EST27A5 EST cfa28 41 3556 42.3 TACAGCTTTTCCAAGTTGATTGTTT CTATCATTTTCTTTTGCCCTTAGGT 198 NA NA AJ537288 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST20A11 EST cfa28 42 3666 43.6 GTGAAAAGGCTCTTGAACATAAGAA CTCATAAACAGACTGTCGTGCAG 101 NA NA AJ537286 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
STS314F05 SNP,STS cfa28 43 3752 44.7 TAGAAAGAAACAAAACGATTTCCAC GAGCTACATTATCCTCAGGGTGTTA 551 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
LEI006 Microsatellite cfa28 44 3794 45.2 ATAGCCTGGAATATCCACTTTAGC TTAGCTTTCCAGACTTCATAGAGG 75-79 NA NA NA NA
REN146G17 Microsatellite cfa28 44 3794 45.2 TGGCTTGACCACCACTGTAA GGTAGGTTTTGCCTTCCACA 312 NA 0.54 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FGFR2 Gene cfa28 44 3794 45.2 ATTTAAAGTATTGTGTTTTGCTTCG GCGTGACATTTATTTTGTCTTGTTA 193 NA NA AF211257 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_381-F10 BAC cfa28 45 3852 45.9 TGGAGGGGTTCATATTTAACAG TTACGTTACCGACCTAAAGACC 330 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_382-C14 BAC cfa28 46 3925 46.7 TAAGGGAAACTAGCTGTCTTGG TAAGTATTCCAGCAGGAAGCAG 349 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_381-B8 BAC cfa28 47 3949 47 AAGACATGTACAAGAGTTCCCC CAAGTTGGCACATAAAATTAACC 311 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST8B4-B EST cfa28 48 3991 47.5 AAAAGTGGGAAAATAGATATAAAATGC TTGTTTGACCAAGCTCTCTTTAG 156 NA NA AJ537291 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN73I23 Microsatellite cfa28 49 4033 48 TGAGTAACCAAGCCCACAC AATATGAGTTGCCCTTGAA 219 NA 0.34 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
EST28H9 EST cfa28 50 4106 48.9 CTATTGGTGTTATGTGCTACCAGAA AAAATAGGTTTGATAGGTTTTGCAT 153 NA NA AJ537289 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
OAT Gene cfa28 51 4148 49.4 GACATCACCTTTCCACCAGG GAAGTCTGCAGCTCTACCCG 150 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
EST-CFZ97746 EST cfa28 52 4233 50.4 TTGTTCCAATCAGGCT AACGAGTTTAGCAGCA 124 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH3622 Microsatellite cfa28 53 4305 51.3 TGTGACGGTTGTATTGTTTCC CTTCACAATTCCCTATTCAGC 480 0.88 0.87 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN51I12 Microsatellite cfa28 54 4378 52.1 ACTTTCTTTGAGCGAGGTG CTGGCCTGTGCTGGGTGAG 220 NA 0.76 NA Mellersh et al., 2000 (Mammalian Genome 11, 120-130)
BAC_372-M11 BAC cfa28 55 4464 53.1 TTGAAGTTGTACAGACATTGGAAAA CACTTCAGTATCAAAGACCTTGTCA 205 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
AHTK135 Microsatellite cfa28 56 4643 55.3 GCAGCTCTCAGCACCCACAC GTGAGTCCACTTGGGGCG 223 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)

 

 

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