Canine Chromosome 25 (Guyon et. al. 2003)

Marker_Name Marker_Type Chromosome Position_Number Position_TSPunits Position_Mb Forward_Primer Reverse_Primer Product_Size HET PIC Accession_Number References
REN54E19 Microsatellite cfa25 1 0 0 GCAGACGAGCACACCGAA TATTCCACATCATTCACC 173 NA 0.54 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_381-A15 BAC cfa25 2 166 1.7 TAAGGAAAGCAAGGTCCAATAC CAAAATGAAAAGTGAAAGCCTC 125 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH3977 Microsatellite cfa25 3 353 3.6 TGGGGAGCATACCATTATTTAC AACATTGTTGCCAACTGTACTC 472 0.76 0.74 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_375-M22 BAC,Microsatellite cfa25 4 453 4.7 TTATGAAGGAAGTCACAATGGTC GTACTGAGATGGGATGATCCAG 238 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST2F3 EST cfa25 5 581 6 AGAGAACTTGGTGAATTCAGAACC CAAATTACTGTAGTATTTCCCAGCTTC 101 NA NA AJ537263 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN166C13 Microsatellite cfa25 6 683 7 TCTTTGCCTTTCAACTGGAGA CCAAAAGTAGTCAAGAAAGGAGGA 156 NA 0.5 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN103F16 Microsatellite cfa25 7 831 8.6 ATAAAACTACATGCAACTAAA GGTCATGTCGGGCATAACTAT 153 NA 0.34 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BRCA2 Gene cfa25 8 1004 10.4 CCATCCTGGCTTTTGTCATT TGTGGGTCTGTGTCTGCTTC 171 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH3245 Microsatellite cfa25 9 1155 11.9 GCTTAGCACAAAGCAACTCC CTCTACAAGTTTCTCATCACTGC 323 0.9 0.9 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_372-E18 BAC cfa25 10 1247 12.9 TTTCCTTCCACAGTAGCACAG TTTGTTGAAGAAACTCCAAACC 176 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_375-K23 BAC cfa25 11 1291 13.3 CCACTGAGTATAATGGTAGCCC AGGTAATGTGCAAGTGTTTTCC 125 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH2318 Microsatellite cfa25 12 1325 13.7 CAAGTCTGAGATGAGGCTTGG TGAGTTCAAATGCCAGCAATC 300 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN94H15 Microsatellite cfa25 13 1436 14.8 TCATTGTTTCTAGGCTCTCAC GCCAAGTTTACCATTCTCACC 213 NA 0.68 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN124F24 Microsatellite cfa25 14 1555 16 ACACAGTTACCACCCCACAT TATGGCCTATCCAAGGAGAG 186 NA 0.66 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN228N10 Microsatellite cfa25 15 1693 17.5 ACTTCTTCCAGCAAAAGGCA GCTGTGGGCCATAGATTTGT 343 NA 0.8 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_417-D6 BAC,Microsatellite cfa25 16 1759 18.1 CCAATATGGGATCCCTGG TCCACATTCTATTTTCCACATTC 462 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN247L23 Microsatellite cfa25 17 1833 18.9 TGAGTCATCTGGGTTGCTTG GGTGTTTTGGAGCAGTGGTT 197 NA 0.58 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH3017 Microsatellite cfa25 18 1926 19.9 TGGGAAAGCTAAGAAACAGG GTCACCAGAGGGATTTTGC 334 0.41 0.39 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH2324 Microsatellite cfa25 19 1950 20.1 AGCTCTATGAAAGGTGATTGCC AGACAGCCATACAAATGAGAATTG 252 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_382-E20 BAC cfa25 20 2041 21 CTTCCCCAAAACTACCCTCTAC CTGTGCCTTCCAAATCTAAATC 309 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
SGCG Gene cfa25 21 2106 21.7 GGTATTGCTGGGTGATATG CTGTGTGTGGTGATTGATG 359 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_385-O19 BAC cfa25 22 2215 22.8 CTCCAATAGTGTCTCTCATGGC CCAGAGAATAACAGCAAAGGAC 389 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_372-A23 BAC cfa25 23 2347 24.2 CAGAGTCGGTTAGAGTAAAAACAGC TAGATAGATCCCCAGCTCTTAGCAG 225 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH3861 Microsatellite cfa25 24 2418 24.9 TTTTAGATCGGCTACTTTCACC ATGCAGGCAAGGAGATAGC 199 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_376-P13 BAC cfa25 25 2535 26.1 ACAGTTTGATCCTGGACTTTTG CCAACATGATGGAAATACAAGG 219 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST18C6 EST cfa25 26 2559 26.4 CATTTGTCTCATGTAGGTTCACTTG GGTTTGGTGTCTGCTAACTGATAAT 209 NA NA AJ537261 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH3923 Microsatellite cfa25 27 2624 27.1 TTTCCTGATTCTTCCTACTTGC TACACAGGTACCTATCTTGGGG 302 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST11H6 EST cfa25 28 2703 27.9 AATAAACATGAAAAGGTGTTCAACC CCGATGTGGTTTTTACCAATTTAT 178 NA NA AJ537259 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST-CFZ97779 EST cfa25 29 2826 29.1 TCCCATGTGGAATTGAGTTTT GCCTTATGATATCCTTGCCG 147 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH1004 Microsatellite cfa25 30 2951 30.4 TTGCAGCCTTTTAAGATTCC AATTCATCTGAGGATGTGTTCC 238 0.19 0.18 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST16E5 EST cfa25 31 3037 31.3 CAGCACTGTATTTTTGTGTTGACAT TTAGTCAGTACAGACGGCAAGATG 172 NA NA AJ537260 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH3327 Microsatellite cfa25 32 3116 32.1 GAATAGGTAAGTATGGGGATGG ACTTGGGCTCTTTTCTTGC 538 0.83 0.81 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN288K01 Microsatellite cfa25 33 3174 32.7 CTAAAACCCACCACCCAGAA GGCTCAGCCAGTTAAGCATC 329 NA 0.42 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH3979 Microsatellite cfa25 34 3259 33.6 TTCCCCTAATGAATAACAATGC AGTTCAGTCAGTTAAGCTTCGG 430 0.85 0.84 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN05E03 Microsatellite cfa25 35 3344 34.5 ATTGGGGCCATTTTACTCTG CAGAGGCAGTCCATGTTACC 283 NA 0 AJ391589 Jouquand*, Priat* et al., 2000 (Animal Genetics 31, 266-272)
BAC_372-E9 BAC cfa25 36 3367 34.7 GACAGGGAGGAGAGTTCCTAGC CTAGTGTGTCCCCTAAACCATCTC 300 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH2817 Microsatellite cfa25 37 3463 35.7 TAAAGGACACAGGGTTGTGG CAAATGCCACTTTTTGAAGC 223 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
PNOC Gene cfa25 38 3535 36.4 CATCAGGAGCCTAATCCAAGC AGTGAAGCCTCCAAATCTCTTCT 103 NA NA AY011861 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
CLU Gene cfa25 39 3613 37.2 CCCCTAGAGAGAGCTCTGCATGTC ACAGGAGTTCTTCCCATGATCAGC 136 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH2748 Microsatellite cfa25 40 3704 38.2 AAGGAAGTCTGGGATGAACC ACACGTTCTCTGGGTCTCTG 206 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_376-O5 BAC cfa25 41 3747 38.6 AATTTGGTGACCAGACATGAAGTAT CCTGGTAACCACCATTTTACTCTATT 193 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH2141 Microsatellite cfa25 42 3770 38.9 CAATGCTCCTTAGATTGCAGG ACCCAAGGAAACTAGAAGGAAG 540 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
STS54O12 SNP,STS cfa25 43 3811 39.3 CTACTCTGAAGCAGCATATCTGTGA TTGCAGATTTGATATAGTTGGAACA 605 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST5E3 EST cfa25 44 3882 40 TGAGTTTAACCTAGTGAGAGGCAAG GTCAATGTCAAGGGAGGAAGAG 106 NA NA AJ537264 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH2006 Microsatellite cfa25 45 4001 41.2 TGGGGGCGTTAAGAGTAATG CTAGGCCTAAACCCCTGAGC 191 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH4041 Microsatellite cfa25 46 4131 42.6 GATATTTTGACTTCTGTTGCCC CTCAATCTGTGTGCTTGATGAC 490 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_382-K1 BAC cfa25 46 4131 42.6 GTCTAGGGACTGCGATATTTTG GGATCTCAGCTGTGAGAAATATG 337 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN311A17 Microsatellite cfa25 47 4173 43 CATGCCATATGCACACATCA AAGGCAGGGTTTGGGTAACT 339 NA 0.18 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
AHTK120 Microsatellite cfa25 48 4231 43.6 GGGTCTCAGACACTGTGTGC TTGCAGGCTAGGCTTTTCTC 115 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
LPL Gene cfa25 49 4389 45.2 GGGCGGGCGGTATGCAGAAGCTCCA CGGATGGCTTCCCCAATGTTA 189 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH3627 Microsatellite cfa25 50 4546 46.9 CCCACTTAAGCAACACAGC GAACCAAGCACCATAGAACC 410 0.77 0.75 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
COL4A4 Gene cfa25 51 4673 48.2 CACCCTGCCCTTTGCCTACT GGACACGGCGGGATGGAC 213 NA NA U50936 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
COL4A3 Gene cfa25 52 4789 49.4 TGCCATTCTTGTTCTGTAAC ATGGCTATGGCAATCGTAGG 600 NA NA U50935 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_382-E17 BAC cfa25 53 4846 50 AGAGCTTAGTCTCATTTTGCCC TAAATTGCTTCCCACTTTTGAG 349 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH3101 Microsatellite cfa25 54 4879 50.3 TTTCCTTTTTCCCTGCTTATC AAACCACAGATCCAAGAAGC 158 0.75 0.73 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
C25.213 Microsatellite cfa25 55 4937 50.9 AATATGGGAGAGGAGAAGAGGG ATGCTTCCTGGTAAGCAATCA 150 NA 0.78 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH3262 Microsatellite cfa25 56 5021 51.8 CTGTGCCTTTCTTGATCTCC CTACTGTCCCTCCCCACTG 217 0.82 0.81 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_381-B3 BAC cfa25 57 5085 52.4 GCTTTGACTTATACATGTGCTTTGA GTAATGTTAAGTTTCCAAGGCAGAA 188 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST10E9 EST cfa25 57 5085 52.4 ATCTGACGCTTTTATTTCTGTCTGT TATACTGCTGTTGTGGAAGAAATGA 197 NA NA AJ537257 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN61G15 Microsatellite cfa25 58 5108 52.7 TTATCTTATGCTGGTGTG AACTTCTGTCTTGTGGAG 144 NA 0.65 NA Mellersh et al., 2000 (Mammalian Genome 11, 120-130)
BAC_381-N14 BAC cfa25 59 5131 52.9 CAGGTTTCTCTTTGAAGGTCAG GTGGGTCTTATTTACCACAAGC 419 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST25A4 EST cfa25 60 5164 53.2 TAAATTACAGGGCCAGCCAGAT ATACTGGAAGTGGTTTCTTTTTGTG 197 NA NA AJ537262 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
PDE6D Gene cfa25 61 5228 53.9 AGGGTTTCTGACACTGGTGG GCCAGTCAGAGCCATAGGAG 141 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
ALPI Gene cfa25 62 5269 54.3 CAAGGGCTTCTACCTCTTTGTG GAAGGAGAACACGTAGGAGTGG 184 NA NA AF250845 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH4027 Microsatellite cfa25 63 5340 55.1 CGTTCTTTCTTCAAAAGAGTGC GCTTGGTCAGTAGAGCATGAG 421 0.9 0.89 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
STS133N13 SNP,STS cfa25 64 5411 55.8 ATATATCCCCTAAAGATGCTGTTCC GGTGTCTGGACCTATTCAGTCTATG 587 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_375-L21 BAC cfa25 65 5482 56.5 GAAATGAGGTCAAACAAGACTGATT AAATACAAACACAAACAGTCAGCAA 211 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
RDC1 Gene cfa25 66 5553 57.2 AGCGTGCGCGCTTCCTAC TTACAGAAGTGCAGGCGAGCC 249 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_381-H21 BAC cfa25 67 5649 58.2 AGAATTTCTTTAAAGCGGTACG TCTAGAAAAGTGGAACAGAGCG 314 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
STS1C06 SNP,STS cfa25 68 5673 58.5 AAAAAGATGCCATTTACAGCAG TGGATCGCACTCATGTTACTATATTT 398 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
CFOR12C12 Gene cfa25 69 5715 58.9 GTGGCCTTCTCCTTCGTCA GATGAAGGCCAGGATGAAGT 183 NA NA AJ431502 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
AHTH226REN STS cfa25 70 5833 60.1 GGGCAAGCTACCTTTCCACTCT CTTTTTAATGAGCCCTTCATGGAAT 210 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)

 

 

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