Canine Chromosome 18 (Guyon et. al. 2003)

Marker_Name Marker_Type Chromosome Position_Number Position_TSPunits Position_Mb Forward_Primer Reverse_Primer Product_Size HET PIC Accession_Number References
FH4060 Microsatellite cfa18 1 0 0 CTAATTTTGGTGGGCTATCAAG TTGCTTTTGTTGTTTTGTTCAG 428 0.84 0.83 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN129P11 Microsatellite cfa18 2 226 2.1 ACTTTATTTCCCTCCTACT AGAAATGCTGATGAATACT 304 NA 0.18 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN162O13 Microsatellite cfa18 3 408 3.8 GCTCAACACGGGCTTTTTAC CCATTGTGTGTGTGCAGCTA 159 NA 0.18 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
SEC61G Gene cfa18 4 676 6.4 GAGTCTTTCATCTTGGGGATTG GGAAGACAAAAAAAAACATCAAAGA 107 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH3944 Microsatellite cfa18 5 894 8.4 CTGTTGAGGAACAGAGAGAAGC TGTGTTAGAATGTTGCTTCGAC 462 0.87 0.86 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_372-M24 BAC cfa18 6 983 9.3 TGAGTCTTTGTTAAACCCTTCCTC GGACATGTATCCACTCTGACATTC 259 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST27A11 EST cfa18 7 1086 10.2 AAAGATGATCAGAAAGACTGTTTGC CTTGCAGTAAATTTTTCACTTCTGA 209 NA NA AJ537195 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST17F4 EST cfa18 8 1111 10.5 CAAATTTTGAGTCCCAGAATAACAT ATAGGGTTACAAGCATTAGGCAAA 129 NA NA AJ537189 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_385-K9 BAC cfa18 9 1213 11.4 CCATGTAGGGTATCTGGTCATC CACAAATCAAGCATGATACACC 390 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN42L13 Microsatellite cfa18 10 1327 12.5 ATGCCTGTGGTAGATG CTGGAAAGCTGAAAAGTAG 165 NA 0.58 AJ391632 Jouquand*, Priat* et al., 2000 (Animal Genetics 31, 266-272)
REN186N13 Microsatellite cfa18 11 1402 13.2 AGGCTCTCCGAGGGTAAGAC ATTGCTTGGATAAGAGGGGG 369 NA 0.66 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
INHBA Gene cfa18 12 1477 13.9 GGGCGCGGGCGGCAAGGTCAACATC ACAGCACGACTTGAGGTTGGTG 238 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_373-A15 BAC cfa18 13 1633 15.4 TCAAACACTCAGACTGGTGAAG ATATCTATGTGATGGCTGGGTC 119 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST10E7 EST cfa18 14 1733 16.3 AAGGCAGCTTTGTAAAAAGAAAAAT TAAGTGGATGCTAATCTTAGGGACA 200 NA NA AJ537185 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH2834 Microsatellite cfa18 15 1833 17.3 GCAAGCTTTAAAATACCTTTCC GCCTGAACTGATTGATGACC 268 0.22 0.19 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN106H23 Microsatellite cfa18 16 1987 18.7 TCCACACTTGGTAAATACTTACTG TGAACAAACAATTCTTTACCTTT 160 NA 0.18 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
STS182J12 SNP,STS cfa18 17 2151 20.3 CCAGAGAAGCATTACAATAGGAAAA GAAGGAGACATGCTGTAGAGACAAT 317 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
DLD Gene cfa18 18 2324 21.9 CTGGAAAATTTTCTTCAACCCTTAT TCACCTGGCTTCAAACACAG 165 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
EST18B12-B EST cfa18 19 2480 23.4 TAAGCCAGAAGGTTGCTGTTTATAG TGAACTTCATACAAAATGTGCTGAT 163 NA NA AJ537190 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_376-M23 BAC cfa18 20 2539 24 GGACGGCCTATTAAATGTCTTACTT GGACCCTTTACATACAGAAACTTGA 219 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN249N22 Microsatellite cfa18 21 2563 24.2 GATGCTCCCTCTGCCTATGT GACACGCACACTCGTCATATTT 301 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
EST7A8 EST cfa18 22 2714 25.6 TATATTTGGTGCACACTTCTTGAAT TATAACTGAAAGTGAAGTTGCACGA 200 NA NA AJ537197 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN54P11 Microsatellite cfa18 23 2834 26.7 GGGGGAATTAACAAAGCCTGAG TGCAAATTCTGAGCCCCACTG 231 NA 0.71 NA Mellersh et al., 2000 (Mammalian Genome 11, 120-130)
DTR18.7 Microsatellite cfa18 24 2933 27.7 ATACCGCCAAAACAATAAAA GTGGCTGTTCCTTTCTTAGT 220 NA NA AJ237690 Tiret et. al., Animal Gen. 30, 462-473 (1999)
REN52K18 Microsatellite cfa18 25 3020 28.5 TGGTATCTGCCTCTTTGTTTA TCAGCTCCCTCCAATCCCA 361 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_373-E18 BAC cfa18 26 3132 29.5 AGATCAGCTTACCTGGGACAG CAAGTGTCTCTGTATTTTCCCC 378 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN183B03 Microsatellite cfa18 27 3320 31.3 TCATTCTGACAGGCATGAGG GGTTTCCAAAGAAGACCTGG 149 NA 0.64 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
EST14G6 EST cfa18 28 3419 32.3 AGTATTGCTATGAAGGCAATTTGGT GGGAAATTTGCCATTTTGATAATA 177 NA NA AJ537187 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
C18.156 Microsatellite cfa18 29 3478 32.8 ACAACCAACACACACAAAAACC TGTTATCCCAGTGGCATTAGG 136 NA 0.47 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_385-G19 BAC cfa18 30 3589 33.9 AAACAAGGTCAAAACCTCAAAC CCTTCCTTTGTATGGAACACTC 404 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_381-D17 BAC cfa18 31 3648 34.4 TCCGTTTGAATTGAAAGGTAAC CTAGCTCACTCAAAAGGAGGAC 309 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_375-H17 BAC cfa18 32 3747 35.3 GCAATGCTCTGAAGTATCTTGG TCAGTGTGGCTACAAAGTATGG 193 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
COS18 Microsatellite cfa18 33 3846 36.3 CGTGGTGCCGGCCCTTTGAT TTTAGCGCCTGCCTTTGGAC 360 NA NA NA Werner et al., 1999 (Mammalian Genome 10, 814-823)
BAC_374-M23 BAC cfa18 34 3919 37 AATTCACCAATTACTGGTCTGG TTGGATCCATAAGAGAGAGGAG 178 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_373-K16 BAC cfa18 35 3943 37.2 CCGTACTATCTTTCACTGCCTC GAAAAGTACAGACAAAATCGCC 218 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH3255 Microsatellite cfa18 36 3986 37.6 CTGTGACCACTCTTTGACTAGC GGTGTGGATTCTGCTTGG 546 0.8 0.79 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH3815 Microsatellite cfa18 37 4059 38.3 AGTCGATAACGCTGAGAACC AGAGCTCAGCAAAAGTCTATGG 338 0.9 0.9 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH3577 Microsatellite cfa18 38 4146 39.1 CAAGGTAGGTTCCACACTGG GCGAGGAAGAGTCAGAAAGG 312 0.85 0.84 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH3477 Microsatellite cfa18 39 4219 39.8 CAAGGTAGGTTCCACACTGG GTGAGAGGGCGAGGAAGAG 320 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH2795 Microsatellite cfa18 40 4330 40.8 GGCTGGACTTTTGTCATTTG TGTGAGTAGGGTAGGGCAAG 204 0.73 0.71 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_381-N8 BAC cfa18 41 4441 41.9 GACAGATTAAGCCAGGAAACAG TTTAGCCTATCTTCCAGCTCAC 358 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_376-N13 BAC cfa18 42 4500 42.5 AGAAAGTTTATAGGCCAGGAGAAAG TAGCTTGAAGAACAAACACCCTTTA 201 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST4D4 EST cfa18 43 4573 43.1 ACATGGCCTCAGCTGACTAGAA CTGGGGGTAACTTTACTGGTTTG 103 NA NA AJ537196 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST20F3 EST cfa18 44 4632 43.7 TTTGAATTTCACATAAAGGGTAAGA CCTTAGGAACCACTGAAATGTATGA 191 NA NA AJ537192 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
CAT Gene cfa18 45 4691 44.3 TACCAAGATTTGGCCTCACC CATCTGTTCAACCTCAGCGA 103 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
CD44 Gene cfa18 46 4777 45.1 TGGAAGAGAAGGTGGACATCTTCC GGTCACCGGGATGAGGGTC 106 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
WT1 Gene cfa18 47 4849 45.7 GGTGCCTGGAAACGTCCG ACCGGGAGAACTTTCGCTGAC 155 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH3824 Microsatellite cfa18 48 4891 46.1 AGGAAAAATACCAAACCAGAAA TTTATCTCTGATTACCTCCTGCC 298 0.9 0.89 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
CFOR04B04 Gene cfa18 49 4963 46.8 GCGTTTTGCTCACAGTCATTC CTTTCCGTTTTCCCTCCA 288 NA NA AJ431412 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
CFOR16E11 Gene cfa18 50 5049 47.6 GATGGTCCTTGCATCTTACTTG CTTGGCTGGATGTAACTAAAGGTC 360 NA NA AJ431540 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
TPCR63 Gene cfa18 51 5107 48.2 AGGATACGTTCCTCAGAGGGCC ATCTAATGAGTGGTTGGTCCCTGGT 129 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
OLF1 Gene cfa18 52 5149 48.6 GTCTCGGGGCATCTGTGTAT GATGGCCACAGAAGTCAGGT 357 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
OLF2 Gene cfa18 53 5208 49.1 AGAGTGTGCTCCCTGCTGAT TGCAACAGCAGTTAAGTGGG 357 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
CFOR08G02 Gene cfa18 54 5295 50 CAAATTCTCTGGTATCAGTCTGT TGATGGCAGTGTAAGTGACC 201 NA NA AJ431455 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN167O08 Microsatellite cfa18 55 5369 50.7 TGTGAGATTGAGTGAGAATCTCTG CTCAGGTGGCTTCCTCACAT 172 NA 0.62 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN248C19 Microsatellite cfa18 56 5412 51.1 TGACTGTGGCAAGCAAGAAC GGCAAAGAAAGATGGACTGG 319 NA 0.64 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH3010 Microsatellite cfa18 57 5471 51.6 CTTTTACCTACGTGCTGTGG CAGCTCTTGGTAGGTGTGC 365 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
EST23A3 EST cfa18 58 5495 51.8 ACGTTATTTTGAATCTGGTTCTGAG GAATTTACTTTCAAAACTGGTTATTCG 105 NA NA AJ537194 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH3352 Microsatellite cfa18 59 5519 52.1 TAGTTCAGTGTCTTTGGCTCAG GGAGCTTCATCTTCCATTACAG 453 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
CFOR04C05 Gene cfa18 60 5640 53.2 TTTCCTGTGACATGTACCCCTTACTA AAAGACCACCACAGTGATGTGA 218 NA NA AJ431398 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN281E03 Microsatellite cfa18 61 5771 54.4 TGGGTCCTTCTGTCTCTGCT TGCATGTAGGAGGTTGCTCTC 303 NA 0 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN258K13 Microsatellite cfa18 62 5813 54.8 ACCTAGTTTGTCCATCCCCC CGAGACGTGGAAACAACTGA 335 NA 0.48 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_376-N21 BAC cfa18 63 5871 55.4 TTTATTGCAGGATTTCACAATG AGCAGATAGGGATAGCATCAAC 232 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_385-K11 BAC cfa18 64 5943 56.1 CCTGAAAACAGGGTGTTAAATC CCATGAACAATGACTACCAAAG 352 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN47J11 Microsatellite cfa18 65 6028 56.9 TCTCCTCGCGTGTTTCTG GGGGACACTCAGAAGGACG 163 NA 0.69 AJ391655 Jouquand*, Priat* et al., 2000 (Animal Genetics 31, 266-272)
REN50L03 Microsatellite cfa18 66 6113 57.7 TTCTTGGGTGTGATAATAGTG TGCACCTTTCACCTACATT 265 NA 0.64 NA Mellersh et al., 2000 (Mammalian Genome 11, 120-130)
BAC_373-I22 BAC cfa18 67 6171 58.2 AGGCAAGTGAGTAGGGGATTAGATA GGACATTTAGGGTACAACATTGAGA 177 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN95P11 Microsatellite cfa18 68 6230 58.8 CCCCCGGGCTCAACTCC GCTCACACGCCCACTTTCATA 195 NA 0.32 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN168H09 Microsatellite cfa18 69 6329 59.7 TGAATTCACTGGGGTTTGGT TGCATGCAAGAACATCCG 112 NA 0 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN266I17 Microsatellite cfa18 70 6388 60.3 CCGGTTGTATGAGCCTTTGT TCACACAGACCAATCCCAGA 132 NA 0.56 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_375-G23 BAC cfa18 71 6430 60.7 CTATGTTGGCCTCCTTCTCTC AGCTGCTGAAATAAAGAGGTTG 107 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
STS66A19 SNP,STS cfa18 71 6430 60.7 GGTTGACTTGGGTAGACACACTG GTTAATGACAAGTGACCTCCTTCTG 408 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_375-E23 BAC cfa18 72 6503 61.3 ATTAAAAGGGAAAGTAGGGCAG GTCGAGGAGCTCTACTCAAGTG 272 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH2429 Microsatellite cfa18 73 6601 62.3 GATCCACTTTGAATTGATTTTTG TTCAGCAAATGGTTCTGGAA 173 0.76 0.73 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
C18.460 Microsatellite cfa18 74 6643 62.7 CTTCCCATTATAGCCCTGTCC GGTGTCAGGAAAATGAGACCA 128 NA 0.53 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
EST22C4 EST cfa18 74 6643 62.7 CCCTTTTCTCAAGTGCCTTAATAGT TGGCAATGAATTTATTAGTTCAGAGTA 157 NA NA AJ537193 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST12G6 EST cfa18 75 6667 62.9 ACTCTAGACAGACCTAAGGGGAAAA TTCTGGCAAGTTTTGTAAGAAGTTT 203 NA NA AJ537186 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST1A1 EST cfa18 75 6667 62.9 CTAGCCTGGGTACCCTTCACTTAC ATTGATGAGGCAGATGACTGAG 102 NA NA AJ537191 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN195J11 Microsatellite cfa18 76 6691 63.1 CCCCGAAGCAAAATTAAACA CTGGGGTTTAACAGCTTTGC 207 NA 0 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH2792 Microsatellite cfa18 77 6715 63.3 TAGGTGTGATCATGGCTTTG TGAGACTTGGACACATTTGC 200 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
AHTK292REN STS cfa18 77 6715 63.3 TTTGTACTCCTAGGACAAGGATTTG TCCTCCTGTGACAATTCAGG 250 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN108A21 Microsatellite cfa18 77 6715 63.3 TTCTGGAGGAGAGAGAGAGTGG TGGGGTTTAAAGTCATTGCC 242 NA 0.32 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
EST-CFZ97737 EST cfa18 78 6739 63.6 CCGATCCATCTCCACAGTCT CTGTCTCTCAACGTGTCCGA 203 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
ROM1 Gene cfa18 78 6739 63.6 CTCTTTGATCCTCGTCAGCC TGAGGGTCAGTAGGTCCCTG 230 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
EST17C6 EST cfa18 78 6739 63.6 TGTAATTTAGGATGATTTAGGATGG TGACTGAAGTTTGTCTTCATTATGC 130 NA NA AJ537188 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN64K04 Microsatellite cfa18 79 6781 64 TCAGGCCAGGAGAAGAAGT TCGGAAATTGTGGAGTCAG 165 NA 0.66 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
AHTK32 Microsatellite,STS cfa18 80 6867 64.8 TACCAAGACCCAACAGCAAG GAGCCTGCTTCTCCTTAT 159 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
PGA Gene cfa18 81 6909 65.2 CTGAGCCTGCATCTCTCCTG CACAATCCCATAGGAAGAACAATC 101 NA NA AB047246 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
AHT130 Microsatellite cfa18 82 6967 65.7 CCTCTCCTGGTAAGTGCTGC TGGAACACTGGTCCCCAG 107-119 NA NA NA Holmes et al., 1995 (Animal Genetics 26, 132-133)

 

 

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