Canine Chromosome 17 (Guyon et. al. 2003)

Marker_Name Marker_Type Chromosome Position_Number Position_TSPunits Position_Mb Forward_Primer Reverse_Primer Product_Size HET PIC Accession_Number References
BAC_382-I6 BAC cfa17 1 0 0 TGAGTAATCCATTTCGTCCTTC CTAAGCCATGGGGAGAATAAC 329 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST17D5 EST cfa17 2 336 4.4 TTCGAGTTGGAGACAGAATCATAGT TAACTGGATAGTAAACCCCGTCAGT 192 NA NA AJ537169 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
COS15 Microsatellite cfa17 3 536 7.1 TGGTTTGATGGGTGAATAGTTAGA CATCCATCCATCCCTCCAGT 207 NA NA NA Werner et al., 1999 (Mammalian Genome 10, 814-823)
REN240A05 Microsatellite cfa17 4 731 9.6 GGCGATGCTTACAAAATGCT TCGTGCTGCGGTGTGTAT 227 NA 0.54 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN64N24 Microsatellite cfa17 5 882 11.6 GCCCCTCTTAGCAGTCAG CAATCAATCAATCAATCATAC 209 NA 0.46 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
DTR15.01 Microsatellite cfa17 6 958 12.6 NA NA NA NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
DTR17.1 Microsatellite cfa17 7 1131 14.9 AATGCTGACACCAGTAGCTT TTCTGCCTGTTTATCTGTCA 142 NA NA AJ237677 Tiret et. al., Animal Gen. 30, 462-473 (1999)
AHTH282REN STS cfa17 8 1282 16.9 TCCATTAACAAGTGCGTGTCAGATA CTCAGAGATTCGCTCGACTTAAAGA 262 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
C17.402 Microsatellite cfa17 9 1435 18.9 AAATGGGTAATTCATCCAGTGC CAGGCTTTGTTGAGGTGTCA 175 NA 0.75 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH3369 Microsatellite cfa17 10 1546 20.3 TCCAGTTACCTAATGTTTAGCC TAGGTGACCACATGGTCTGG 274 0.85 0.84 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH2321 Microsatellite cfa17 11 1632 21.5 CCACTCTGAGTACAGTTGAATTGG ACAGTTTTAGTTTTGGAGACAGGG 315 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
GS3955 NA cfa17 12 1690 22.2 NA NA NA NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_376-A9 BAC cfa17 13 1748 23 GAGAGAGAGAGAGAAAGGCAGAGAC GGGATGACTTTGATTCTTTTCATTA 210 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH4058 Microsatellite cfa17 14 1806 23.8 TGGATAGCACACAACTGCTAAG GTAACAGAAACAATGACCACCC 319 0.89 0.88 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH4061 Microsatellite cfa17 15 1892 24.9 TTGAAGTCTTGTCTGCAAAGTC GACATGCAAGCATTAAAATGTG 404 0.78 0.76 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN169J04 Microsatellite cfa17 16 1934 25.4 CCATCAGTATGCATCTCACCA GAAGGGGGAGACGAAAGAAG 330 NA 0.64 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH3349 Microsatellite cfa17 17 2032 26.7 CAGCTGCATCCTCATATCATAG TTCCTCATTTTGGAGAATTGG 341 0.81 0.8 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_382-E2 BAC cfa17 18 2104 27.7 AAAGGATCCTCCACAAACATC CCTTCAGGGAACTCTTGTAGTG 304 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
STS163A22 SNP,STS cfa17 19 2177 28.6 ACAGCATCCAAGTCTACAGTCTCTT GTGTCACTTTCCTCAAAGTTTCAAT 419 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH3047 Microsatellite cfa17 20 2316 30.5 GCCAAGATATGGAAACAACC ATCAGATAGCTGGGTGATGG 204 0.77 0.74 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST24F7 EST cfa17 21 2387 31.4 GCTTTGTTTTGCTTTTTCATAGTAG CATGCTTAAATGTTGAGCTATCAAA 103 NA NA AJ537175 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH1003 Microsatellite cfa17 22 2410 31.7 TAAGTGGCAATCTGGACTCG TATTTGCCCCTCTTCTAGCC 245 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH3809 Microsatellite cfa17 23 2491 32.8 AGACATTAATCCCTCTTCCCTC GTTTAGAACAAGGGAAAGCAAG 498 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_373-C22 BAC cfa17 24 2603 34.3 AATGGTCCTGTAACCTTGTTTG AGAATCATTTATTGTGGGATGC 302 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
CPH5 Microsatellite cfa17 25 2744 36.1 TCCATAACAAGACCCCAAAC GGAGGTAGGGGTCAAAAGTT 111-119 NA NA NA Fredholm & Wintero, 1995 (Mammalian Genome 6, 11-18)
EST13A9 EST cfa17 26 2785 36.6 TCCCAGATATAAAAATGGTAAATGC AGCATATTAACCAGAGAAAGGGAAG 200 NA NA AJ537165 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
AHTH265 Microsatellite cfa17 27 2841 37.4 GGACCCCTAATACCCAGTAACATT GTGCAGGCTATAAACCAAAAACTT 238 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
EST3E1 EST cfa17 28 2864 37.7 CAGTGCTAACAAGTTCTACCAGTGA CTGTCATAGCTGAAGGCACTTTAAT 191 NA NA AJ537183 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
C02604 Microsatellite cfa17 29 2920 38.4 CTCACCCAGAGGATGCTTTGAA TTAACCTGAGAACATGGCACAA 190 NA NA NA Yuzbasiyan-Gurkan et al., web site
EST26F4 EST cfa17 30 2961 39 AGGGGGAGAAGAAATTGACATTTA TTTATACAGCACATGTCACAAATCA 196 NA NA AJ537181 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_372-G23 BAC cfa17 31 2984 39.3 CACTATTAGCATCAGTTTGCAGAGA CTCATCTGGGAATAATAACGGTGTA 204 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST16D1 EST cfa17 31 2984 39.3 ATCCACAGAACATGAGAATCCTTT TTTAGTGACATAAGCCTTACAATCG 197 NA NA AJ537167 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN01K01 Microsatellite cfa17 32 3007 39.6 CCAGGAAAGAAAAGATGACT TGCTAATACAGAAAACCAAT 363 NA 0 AJ391534 Jouquand*, Priat* et al., 2000 (Animal Genetics 31, 266-272)
REN85O06 Microsatellite cfa17 33 3030 39.9 ATACTGCCAGAGAAGGAAGGA AGGCAGCTCAGACTCATCAG 205 NA 0.76 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN294E18 Microsatellite cfa17 34 3087 40.6 CACTGCCATTGCTGTCACTT CCACCATAATGTCACCCACA 300 NA 0.76 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN02C03 Microsatellite cfa17 35 3182 41.9 TGCATATGATTACAGCTAAA TGCTATATTTTTCCTGTTCA 226 NA 0 AJ391536 Jouquand*, Priat* et al., 2000 (Animal Genetics 31, 266-272)
EST11D10 EST cfa17 36 3277 43.1 ATCCCATTGAATTTCTAGCATCATA GGAAATAAGTTCTGTTGTCCTGAAG 199 NA NA AJ537164 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN191O19 Microsatellite cfa17 37 3334 43.9 CCACACCCCTTAATCCTTCA GGGCTAACTCCTTTTGCCTT 316 NA 0.32 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
EST24H5 EST cfa17 37 3334 43.9 CTAAATACCTGGTTTCAGTTTCGTT TTCATATAACATTGTTCAGGACAAGA 201 NA NA AJ537176 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST26F1 EST cfa17 38 3375 44.4 GAATTGGTTTTACCTTTCTCCAGAT CACTTCACCAACACTCCAAAATC 121 NA NA AJ537179 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST17A10 EST cfa17 39 3416 44.9 GAGGATTTCAAAAGTTAATGACAGG GAGCCTTCTGTGTATCTTCATCTTC 162 NA NA AJ537168 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
VIT NA cfa17 40 3556 46.8 NA NA NA NA NA NA NA
BAC_373-A18 BAC cfa17 41 3649 48 CTTGCATCCAATGTGATTTTAAGT AGGAGGTCACATAACAGAAAGGAG 250 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN50B03 Microsatellite cfa17 42 3690 48.6 ATGTGGGGTAAAATAAAGG AACACTGACATGCATCCAC 193 NA 0.74 AJ391664 Jouquand*, Priat* et al., 2000 (Animal Genetics 31, 266-272)
BAC_382-E3 BAC cfa17 43 3746 49.3 CTAGGCATTACTTCACCAGTGC AAGTCCGATGTGGAACAGG 344 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
SLC8A1 Gene cfa17 44 3787 49.8 CTGGTTACTCCTCAATATGCCAG AAGTGTTTCCATTTGGCTGTG 150 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH2849 Microsatellite cfa17 45 3843 50.6 CCCACAAGTCTCCAGTTCAG CCCTGTGTGTCTATGTCTCTCC 209 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN164F06 Microsatellite cfa17 46 3866 50.9 GGCTACTCCTTTACCAGCCA TGAAGGAATGCCTACCCATC 158 NA 0.18 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
EST20H9 EST cfa17 47 3923 51.6 GTATCTAAGCAGGCAGACCAAGAG AGGTATGGGGAGCTAATAAAAAGTG 139 NA NA AJ537174 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH4023 Microsatellite cfa17 48 4049 53.3 CAATGGAAAGTAGGCAAATAGC CTCCACTTCTGATGTCTCCTTC 467 0.81 0.79 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST24H8 EST cfa17 49 4090 53.8 TCCTTTCTAAGGATGGAGTTCTGTA TCAGAGTTCCTGTTAGCAACAGTCT 118 NA NA AJ537177 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_373-E2 BAC cfa17 50 4113 54.1 CTTCCAAACTCATTTTACAAGGCT GTTAAGTAGCTTTTATCCCCAGCA 291 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
IL1A Gene cfa17 51 4181 55 TGCCTGAGACACCCAAAAC GTTTTCCAGTATCTGAAAGTCAGTG 185 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
IL1B Gene cfa17 52 4221 55.5 CTGCTGCCAAGACCTGAAC CTTCAAAGATGTAGCAAAAGATGC 191 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN189C11 Microsatellite cfa17 53 4334 57 GGTGACACATTGTCCCCAA TCTTGATGTGGAGAGGGACA 244 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH2847 Microsatellite cfa17 54 4467 58.8 GGCAGTTTGGGTAAGTAGGG GGGTGTGATAAACATTTCTGC 206 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
EST19A2 EST cfa17 54 4467 58.8 TCACAAGCCTGATCAGTAAAACCT GGTATGACAGGTTGCAAGTACTGTT 153 NA NA AJ537171 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST5B4 EST cfa17 55 4490 59.1 TGGCACAGTATTTAGACTGAATGAA CACTTTCAAAGGAGTGGACTAGAGA 202 NA NA AJ537184 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
STS264K20 SNP,STS cfa17 55 4490 59.1 CTGAGAACTACATAACACGGCCTAT GTTCAAAAGTGGTAAGTGCTAAGGA 603 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH2843 Microsatellite cfa17 56 4513 59.4 GGTCTTTGCCTTCCACTATG TTTCCCATGACAAAGTCTCAG 241 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_372-K11 BAC cfa17 57 4584 60.3 GTTCATGAATCTTTCTGTTCATTCC AGTTAACATTGGTTTGAGAGTCAGG 206 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH3488 Microsatellite cfa17 58 4607 60.6 GCAAAATGTAATTGGAAGACC GCCATGGTTTTGAATTGG 320 0.85 0.84 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN227L20 Microsatellite cfa17 59 4648 61.2 TGGAAGCAGCCTAAATGTCC GCATAATACCCTCAAGGTCCA 333 NA 0 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH3995 Microsatellite cfa17 60 4704 61.9 AAGGAAATGCTTTCTCAAAGAG GGTCAATATAGTCCAGTGGCAG 436 0.9 0.89 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN291O02 Microsatellite cfa17 60 4704 61.9 TCACCCCAGGATGTATTGGT CCATTTTCTGCAGGGAATTTT 202 NA 0.42 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_382-I23 BAC cfa17 61 4760 62.6 CCATCAGTGTTAATTGATGCC GGTTTGGAACCACTGCTTTAAC 397 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_373-O20 BAC cfa17 62 4816 63.4 GGATCTGTTTTTGTTTGTTTGTTG CAAAACTAAAACTAGGCTTCAGGG 217 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST26C5 EST cfa17 62 4816 63.4 TCTTTAAATAAATTCTCCGGGAGTC GAGGACATATGATACTTCAAAAATTG 133 NA NA AJ537178 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN310J13 Microsatellite cfa17 63 4872 64.1 GGCAGAAGAGAACCCAGATG ACACTGCTCCAGCCTCTCAT 340 NA 0.74 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN71C16 Microsatellite cfa17 64 4965 65.3 CCGCTGTCTTCCCCTCTATCG GGTATGTTGGGTTTGGTCCTG 249 NA 0.68 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN112G06 Microsatellite cfa17 65 5021 66.1 CTTTCATGGCATAACACATG ACTCATCCCTTTATGTAACTTAGC 217 NA 0.58 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
EST28B4 EST cfa17 65 5021 66.1 GGGTATCCCTGGTCAGTAAGAATT GGATGTTTTCCTTGTTTGCCTC 111 NA NA AJ537182 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST16A1 EST cfa17 65 5021 66.1 ATAGCTAACCATCAGTTTCACCAAT GATTTCATTGCATATGCTTACACAG 191 NA NA AJ537166 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
TSHB Gene cfa17 66 5044 66.4 TCGAAAGGAAAGAGTGTGCTTACT TTACACTTGCCACACTTACAGCTTA NA NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH3775 Microsatellite cfa17 67 5085 66.9 CCATTCAACAATAAAAGGATGG ACTGTTTGTTAAGGCTTGCTTG 192 0.88 0.87 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
NGFB Gene cfa17 68 5108 67.2 TGGGATCCACAGTGATGTTG TCAGCATTCCCTTGACACAG 104 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_376-B15 BAC cfa17 69 5202 68.4 AATAACAATAATCCCTCCAGGC AATCCAAATTTCATGTGCTACC 181 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
NOTCH2 Gene cfa17 69 5202 68.4 ATTTCATGCAGGTTAGAGAAGGAC CTGTCTGAGAGCTCAGTGACCTTA 200 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN112G10 Microsatellite cfa17 70 5243 69 GAGGGATGGCTGTCAAGA TGGTGGATAAATAGATAAGGA 172 NA 0.7 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
G07301 Microsatellite cfa17 71 5300 69.7 GCATTCACCCAATAGTCCTTG GCTGCTTCTCCCTCTGCCTAC 135 NA NA NA Yuzbasiyan-Gurkan et al., web site
CFOR12C10 Gene cfa17 72 5371 70.7 CTGTGATACACACAGTGCTGG ATGGAGCACAGACTCATTGAGA 134 NA NA AJ431500 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
PEZ8 Microsatellite cfa17 73 5412 71.2 TATCGACTTTATCACTGTGG ATGGAGCCTCATGTCTCATC 213-260 NA NA NA Halverson J. in Neff et al., 1999 (Genetics 151, 803-820)
EST18C11 EST cfa17 74 5453 71.8 GTCCATGTACACTCTATTTGGGGTA AAAAACAGGAAGTTAGGGAAACATA 145 NA NA AJ537170 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST20F7 EST cfa17 75 5477 72.1 TGACCTTTTCTACATGTTTTCCAAT CTACCTGGAGCCTTATCTCTTACCT 205 NA NA AJ537173 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH4035 Microsatellite cfa17 76 5548 73 ATTCATCCTTACTGTCCACCTG GATGGAGCTTAGTCTTGTCCTG 487 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
CPH10 Microsatellite cfa17 77 5605 73.8 TGCAAGACATGATATGTGTTTATG GTGAGAGGCAAAAATGACCA 148-164 NA NA NA Fredholm & Wintero, 1995 (Mammalian Genome 6, 11-18)
IVL Gene cfa17 78 5662 74.5 AGCAGCCTGCCTTTGTCCC TCACTGGTGTTCTGGAGGGTCAT 122 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
EST19D1 EST cfa17 79 5703 75 TTTCAAATACTGAAAAAGTCCCTTG TAAATATGACAGATGCAAACAGCTC 198 NA NA AJ537172 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST-CFZ97795 EST cfa17 80 5785 76.1 TCTCACTGGCTTAAGACTGCTT CTGGCCTTCTGTTGTTTGGT 100 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
EST-CFZ97793 EST cfa17 81 5879 77.4 TCCCCTAGGGACTCACCTTT AAATCAACAGGGTGAGCAGG 160 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
EST-CFZ97800 EST cfa17 81 5879 77.4 ACCCCAATCCAACATACCAA GTCCTCAGGAAAACAGCAGC 137 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
EST-CFZ97821 EST cfa17 82 5949 78.3 AAACCTCCTTTTAGCCACCAA CGCAATGGTTTTCTGAAGGT 138 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN312H06 Microsatellite cfa17 83 5972 78.6 ACCTCCACTGGCAGACATTT GTGAGTTCAAGCCCCACACT 272 NA 0.18 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
ADORA3 Gene cfa17 84 6041 79.5 GCAATGTGTTGGTCATCTGG GTGAAGATCAACAGCAGGCA 205 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH2869 Microsatellite cfa17 85 6081 80 CATTAACAAAATTGCTTCAGTCC CACACCAATAACCCAGAACG 204 0.69 0.66 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)

 

 

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