Canine Chromosome 16 (Guyon et. al. 2003)

Marker_Name Marker_Type Chromosome Position_Number Position_TSPunits Position_Mb Forward_Primer Reverse_Primer Product_Size HET PIC Accession_Number References
REN214L11 Microsatellite cfa16 1 0 0 AAATTGCAAATCTTGGCCC TCCATGCTAAGACCCCCATA 226 NA 0.7 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN173J16 Microsatellite cfa16 2 138 1.5 ATGTGCCAGCTCCTCATTCT AGTCTGGGTCTTGGTCCCTT 167 NA 0.48 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_385-M5 BAC cfa16 3 253 2.7 ATTCCATAAAACCAATTCACCC AAAGAGATAAGTGTCAGCCCAG 306 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN238J02 Microsatellite cfa16 4 368 3.9 AAGCTTAACCGACTGAGCCA GTTTGGTGATTTTTCCCAGC 287 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
EST-CFZ97788 EST cfa16 5 482 5.1 TCAGGGAACTGCCAAATAGG CAACAACCTTGCAATCATGC 140 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH2670 Microsatellite cfa16 6 607 6.5 GTGGAGTCCTGTGTCTTGATG CTTCTGTTGAAAAATGCAGTCA 191 0.85 0.83 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN199I06 Microsatellite cfa16 7 754 8 ACGCAGTGAGAAGAGAAGGC GAGTGTAAAAGGTTAGGGTGTGTG 223 NA 0.76 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_372-I15 BAC cfa16 8 843 9 GTTGCTTTTCCTGTGTTCTTTC ACTGCTTCCACTTGTCATTTTC 140 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN206C13 Microsatellite cfa16 9 945 10.1 GTATGGGACGGATGGAGAGA TGTTTCACTTTTGGCCATTG 123 NA 0 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
CFOR12C11 Gene cfa16 10 1071 11.4 TAATTCAATGATGCAGGCAAT TGGCAGCAACTATACGAACA 209 NA NA AJ431501 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
OLF3 Gene cfa16 11 1160 12.3 CACTTACATCCAGCCCCG TGCCCTAATAGTTTCTACCA 149 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_382-C22 BAC cfa16 12 1285 13.7 ACTTCAAAGTCTACCCACCTTG TATTTTCTTACTGGAACCCACC 332 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN73O19 Microsatellite cfa16 13 1421 15.1 AATGGGGCTAGCTACTCTGGT CCTGTCTATCCCTGCCTTATT 171 NA 0.18 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
HCVB72 Gene cfa16 14 1510 16.1 TGACCCTGAGATGTTCCCTT TCCAGCTGGGAGCTGTAGTT 184 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
HCVB3 Gene cfa16 14 1510 16.1 CAAACCCCGAGACAACTCAT CAGACCTGGGTCTTGTCGAT 111 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_381-L21 BAC cfa16 15 1611 17.1 CCAAACTGTAAGAGCTGAAGTG GAGAATGTCACATCCAGTCAAG 324 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
CUN50002 NA cfa16 16 1784 19 NA NA NA NA NA NA NA
CLCN1 Gene cfa16 17 1955 20.8 CCAATTTTCCCAGGGTTTTT CATTTGTAGAGTCTGCGCCA 145 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
HCVB21 Gene cfa16 18 2028 21.6 TCACCTGAAGATGCTGATGC TGGTTAACAGGGAACTTGGC 276 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
HCVB4 Gene cfa16 19 2086 22.2 CTGGAATTATCCAGAGCCCA GGGGGAAATCCATCTTGTTT 231 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN85M08 Microsatellite cfa16 20 2436 25.9 TTCAGAGGTCCCTTAGAGA AGCACGAGCTTACCCACAT 189 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN85N14 Microsatellite cfa16 21 2552 27.1 AAGGCAGGAGGAGGAGCAC TATGGAGATGGAGGGCACAC 239 NA 0.78 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN176D05 Microsatellite cfa16 22 2665 28.4 CTGTGAACAATGCTGCTGGT CCAACCCAGAAAACTCCAGA 298 NA 0 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_372-M3 BAC cfa16 23 2816 30 CCCTGTGACACATACTAGTTCTGATT CCTTTGCTGTCTTAAAATGATTGAT 184 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
HUEST-D59484 EST cfa16 24 2927 31.1 CCGGGAAGATGTCTATTTTT TTCAGAGCACTTACATTAGGAAA 159 NA NA NA Priat*, Jiang* et al., 1999 (Mammalian Genome 10, 803-813)
BAC_372-C19 BAC cfa16 25 2993 31.8 GGAGTTCTAGGAGGGTTCCTCTAC GGCTTTTTGACAACTGACATTTTA 197 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST12G9 EST cfa16 26 3037 32.3 TGCTCATTATTGTTTTTCTTTGTTG TAGTGCCTCAACAGATGAAGATATG 180 NA NA AJ537160 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
KCNH2 NA cfa16 27 3152 33.5 NA NA NA NA NA NA NA
AHTH260Ren STS cfa16 28 3299 35.1 CGCTATACCCACACCAGGAC CCACAGAGGAAGGGATGC 245 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
CFOR08B12 Gene cfa16 29 3649 38.8 GGGTGGATCCATCAATGCC GAGTGCATCCCAAGCACTGCT 240 NA NA AJ431436 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_381-L9 BAC cfa16 30 3828 40.7 TAAAATTTTCTTTTCCTGCATTTTG GAATAATTTTTGCCAGGTTCAGTAG 191 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_381-I2 BAC cfa16 31 4178 44.4 CTGGCTGTCGAAATAGGAGTAG GTGAGAATAAGTCTCTCCACGC 297 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH3592 Microsatellite cfa16 32 4250 45.2 AGGTGCTGAGCATGTTATCC GGGTCAAAGTGTTGACATGG 323 0.82 0.81 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH2764 Microsatellite cfa16 33 4308 45.8 ATATGCACGTCAGCACATTC TGTCACAGAAGTGGTTTTGC 149 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH3388 Microsatellite cfa16 34 4332 46.1 TCAGAAGGTGCTCATATTTTCC TAATTGAACCCACAACTTGG 235 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN96I08 Microsatellite cfa16 35 4482 47.7 CTTAAGTGAAATGGCAATAGG AGGGAGCTGAATGGATGAT 207 NA 0.66 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH2990 Microsatellite cfa16 36 4632 49.3 GGTTGGGAATTTCTTACTGG CTTGCTCAGCTGGAGACC 433 0.85 0.84 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_373-M20 BAC cfa16 37 4741 50.4 TATAAAAGCCATTCTCAGCTTGTG CCTTCATTGAATCCTTTCAACTCT 248 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_382-M5 BAC cfa16 38 4799 51.1 GATTGTATGGGGATGTGTTTATG GTGATAAAGAGATGTTGCAGCC 352 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH2155 Microsatellite cfa16 39 4857 51.7 TGTAGATGATGGAGACATTGGG AGGCAAATATGCCAAGGATG 457 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
SPC22 Gene cfa16 39 4857 51.7 TATTCCCTGTATGTCCATGATTCTT ACCCTAAAAGAGAATGTCCACTTCT 150 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_381-M3 BAC cfa16 40 4985 53 TTTTCTTTGATTCATGTGCTTATCA CTTCATTAGGCAGGGATATTAGTGA 201 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN124F19 Microsatellite cfa16 41 5069 53.9 ACCTTTGTAGCCCAGTTC GGACGTGTCTTATCTCTTG 152 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN124F09 Microsatellite cfa16 42 5141 54.7 ACGCAGGACTCCGATAATA AGCCTGCTTCTCCTTCTTT 241 NA 0.46 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_375-A8 BAC cfa16 43 5278 56.1 TTTGGAAGGTGATGATATCTGG TCCTGTATCTGAACTACCTGGG 112 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN292N24 Microsatellite cfa16 44 5336 56.8 GCCCTCAAGCTCAATCTACG TGCAACAGTCAAGACATGGA 140 NA 0.66 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
EST11F8 EST cfa16 44 5336 56.8 CAAGATATTTTGTGCATTTGTTTTG CACTTCAAGGGAAGAGGACATATAA 117 NA NA AJ537158 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_376-I13 BAC cfa16 45 5360 57 ATTGAGAACAAACATTCATTGC TAAATAAGCTCCTTCCCCTCTC 116 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_381-L19 BAC cfa16 46 5384 57.3 AGTAAAGACCACAAGAACCAGG AGTGTCTCCCATTATCAGCAAC 302 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN138D05 Microsatellite cfa16 47 5494 58.4 ACAACCCCTTCTAAAAACT TGGAATGAAAGCCCTATCT 172 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN275L19 Microsatellite cfa16 48 5536 58.9 CCTGCATAATCCTGCAATGA CTATCCTGCTGCACCTAGCC 230 NA 0.48 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN44K22 Microsatellite cfa16 49 5594 59.5 TAATGTCAGTTAGTGATAGA CAGCCTGCCTGCATTAGTCT 272 NA 0.46 AJ391644 AJ391645 Jouquand*, Priat* et al., 2000 (Animal Genetics 31, 266-272)
EST22A7 EST cfa16 50 5680 60.4 TTTCCTATATCCTTGCTCCTTTTCT ATTAAGGGTCCTGTCATTAGCACTT 193 NA NA AJ537162 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH3096 Microsatellite cfa16 51 5722 60.9 TCAGCTCAGGGAGTGATCC ATGAGGAGGTGCAACTATCC 209 0.8 0.79 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN71F11 Microsatellite cfa16 52 5764 61.3 TTCAAGGGCTCTCACAAAG TGCATATCACTCAGAAACAA 252 NA 0.42 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
C16.147 Microsatellite cfa16 53 5822 61.9 CCATGGGAAACCACTTGC ACTTCATCATGTCTGGAAGCG 182 NA 0.56 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH3058 Microsatellite cfa16 54 5880 62.6 GCCTTCCATAGATGAATGAGG CCATACATGGTTTTGAGAACG 230 0.71 0.68 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN54I19 Microsatellite cfa16 55 5966 63.5 CTTCCAGGGATTTCTTTCA GGGCCTACTTTATGTGTCTG 159 NA 0.82 NA Mellersh et al., 2000 (Mammalian Genome 11, 120-130)
BAC_385-I21 BAC cfa16 56 6087 64.8 ATCCAGCTCCTTGTCATTGTAG GGGCTTCTATGTATGAAGGGAC 365 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH2175 Microsatellite cfa16 57 6145 65.4 TTCATTGATTTCTCCATTGGC AGGACTCTAAAAACTTGCCTCC 251 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN130B10 Microsatellite cfa16 58 6275 66.8 GTGTCTCTGCCTCTGTGTA TATTCATTTCGTAACTGGA 135 NA 0.72 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_373-G23 BAC cfa16 58 6275 66.8 AAAATGTTTTTCAGGCAGGTTTAC ATATGACCAGAAGGGACAGATGTT 205 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH3290 Microsatellite cfa16 59 6299 67 CTGAAATACAGACATCCTGTGG CGCGCAAATAAATAAGTAAAACC 292 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN210K18 Microsatellite cfa16 60 6440 68.5 TCCATGTGGTGCATCTAGGA AATGCACTAGGGAAGCCATTT 217 NA 0.48 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN88H03 Microsatellite cfa16 61 6580 70 GATGTGAAATACCGACCTTA AGCCTGCTTCTCCCTCTG 142 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_382-I4 BAC cfa16 62 6665 70.9 TTTGGTTCTAATATCCACAGGC GAGAGCATAGGCAATGGAATC 411 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST23C6-B EST cfa16 63 6750 71.8 TGTTTTATGGTATTTTGTTTTCATTCA ATCTTCAGGGAACTGAGCTAATCTT 98 NA NA AJ537163 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST19E10 EST cfa16 64 6792 72.3 CAGTGTCTGATGCATTGTCCTTAG TTGACATCCAGTTTATGAGAAACAA 135 NA NA AJ537161 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
ADRB3 Gene cfa16 65 6863 73 CGAGGTCTGAAGGATAAGCG TGTCCACAATCTCGCAGAAG 157 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)

 

 

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