Canine Chromosome 15 (Guyon et. al. 2003)

Marker_Name Marker_Type Chromosome Position_Number Position_TSPunits Position_Mb Forward_Primer Reverse_Primer Product_Size HET PIC Accession_Number References
EST6H9 EST cfa15 1 0 0 AGAAGGACTGGGTTTATTTTCTGAC GTCTCCTTTTTCTATTTCTCCCAAC 176 NA NA AJ537155 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
DTPRH02 Gene cfa15 2 286 2.9 GCCATCCTCTCCGATACAAG TAGACAATGACAACCAGGGTCA 274 NA NA X64972 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN50K13 Microsatellite cfa15 3 472 4.7 TCAGGTTTTGGGGGTTTTC TATCGAGATTTTACATTCA 191 NA 0.47 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN219H03 Microsatellite cfa15 4 576 5.8 TTTCAAAGAACCTTGCCCAG CCTCCCCCTGCTTGTACTCT 206 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH3802 Microsatellite cfa15 5 693 6.9 TTTTCACCAGCTCTGAGATAGC TTTCTGAGCCACTTTTCCATAG 265 0.54 0.44 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_381-G3 BAC cfa15 6 899 9 AAAATGACAGTACACGGTATCACAA CCCAAAAGTGATATGCTGTGTTATT 219 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_381-B4 BAC cfa15 7 989 9.9 CACTTCTTGGCATTCTTATGG CTTGAAGGATGGGTGATATTTG 320 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_375-E10 BAC cfa15 8 1093 10.9 TTTAATTTTTGTGTGCCTTAGTTCC TCACTTTCATTAATGCTTGTGGTAG 189 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
STS114F02 SNP,STS cfa15 9 1242 12.4 ACTATTCTAACATTGGACATTAGTG AACTAATTAAAACAGGCAAAAGAAGC 632 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST23B4 EST cfa15 10 1318 13.2 AAAACTTTATTTGCCTTCTGCTCAT CCGGATCCTATCACTGTGTACTT 108 NA NA AJ537150 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN297D17 Microsatellite cfa15 11 1421 14.2 AGTGACCGACACCCTACACC AGGCAGAACTCGCTTAACCA 211 NA 0.34 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
STS116E16 SNP,STS cfa15 12 1554 15.5 ATTCTTTGCTCTGAAATCTGTTTTG TCCTTCTTCCATAGTTACATCATCC 598 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST11A3-B EST cfa15 13 1801 18 TTTTCCAGAGTGAGGTTAAGTAACAA TTGGTTTAAAATACCTTTTCTGCTC 183 NA NA AJ537141 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST2D8 EST cfa15 14 2004 20 AAAAGGCTACAGCAGAGTGATTTC CTTCTTTGCTATTAAGGCAACAGTC 150 NA NA AJ537153 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_376-I5 BAC,Microsatellite cfa15 15 2179 21.8 AGTCTTCCTGTGCTGCTATTTG TGTATCAAGCCAGTGACAGAAC 390 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST29C3 EST cfa15 16 2382 23.8 AGAACGAGCCATTTGCTACTGT CAGAGTCCCTTGAACTCTCATACA 144 NA NA AJ537152 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH4012 Microsatellite cfa15 17 2513 25.1 TCCCTATCATCAAGGAGTTCAC CATTCCTTCATTTTCACCTCTC 445 0.78 0.76 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
AHTH257 Microsatellite cfa15 18 2633 26.3 CCCACACCTTTGCTGGAC TGGGAGATCCAAGAGGAGG 126 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH3833 Microsatellite cfa15 19 2736 27.4 TCACTTTCTCCAGGTCTCTCTC CACTGGGTGATGTATGGTAGTG 411 0.78 0.76 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH3886 Microsatellite cfa15 20 2843 28.4 TGCCTTAGCTACCTTCTACCG GTATGGAGCATGGAGTCTCG 419 0.73 0.7 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH3888 Microsatellite cfa15 21 2903 29 TGCCTTAGCTACCTTCTACCG GTATGGAGCATGGAGTCTCG 418 0.68 0.65 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_381-D2 BAC cfa15 22 3049 30.5 ACCATGAATTTATAGTGGTGCC AAAGAAGGAACAGGGCTTAATG 362 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_382-O14 BAC cfa15 23 3138 31.4 GGTGATCAGGACAGAAAGTAGC GTTCGAGGATTCTAGAAGGGAC 313 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_381-O17 BAC cfa15 24 3198 32 TGAGATACCAGAACTACATACAGCA GTACCAGCAAAGTGGCTAATCTTTA 210 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST8D7 EST cfa15 25 3305 33.1 AGAGATCCAACTGTATGCTGAAATC ACTCGTGAGAGCTACGATGATGTAT 214 NA NA AJ537156 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
CFOR03E02 Gene cfa15 26 3364 33.6 TGGGAGCGCTGGGTCATT CAAAGAAGAACATTACTACAGTGAAA 306 NA NA AJ431401 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST16C9 EST cfa15 27 3438 34.4 GTCCTTCCTAATATGCTCCCTGA AGAGGAGACTGAGGGTACTGAGG 172 NA NA AJ537146 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN06C11 Microsatellite cfa15 28 3538 35.4 TGCAGGGCAGAGGCTGGAGG GGGGGTGTCGGTGGAGTTCT 89 NA 0.79 AJ391592 Jouquand*, Priat* et al., 2000 (Animal Genetics 31, 266-272)
FH3813 Microsatellite cfa15 29 3888 38.9 GATAGAGCTCCGTATCATGCTC TCTTTGATCAACTACCTCATGG 423 0.82 0.81 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN247M23 Microsatellite cfa15 30 3986 39.9 TGGTAACACCAAGGCTTTCC TGTCTTTTCCATGGTGGTGA 270 NA 0.56 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN307J23 Microsatellite cfa15 31 4059 40.6 TTCCAAAAATGTATGTGTGCATC CACTTTGTGTCAGACTTCTGGTT 357 NA 0.76 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
MYF5 Gene cfa15 32 4117 41.2 CCATTTTGCATGGTTAACCCCACG GCAAGTGTGTTTGCAGGGCTTGGC NA NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN122C19 Microsatellite cfa15 33 4159 41.6 ATGGCTATGGCTGTTTA TTCTCTGTGTCTTTCTGTCTC 196 NA 0.32 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_376-N11 BAC cfa15 34 4217 42.2 ATAATAAAAATGGTGAGGGGAAAAG TAGCTTCCTGGCTAGACATGATAAA 219 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN265J03 Microsatellite cfa15 35 4275 42.8 ATTTGCTTAAGAAGCGGCAG AGTTTCATGCTGTTCCCCAG 179 NA 0.7 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH2535 Microsatellite cfa15 36 4333 43.3 GTCATTGACAGACTACAAATCTCC ACAGACTTGCAGTATTTTGTCTG 145 0.86 0.84 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH3685 Microsatellite cfa15 37 4405 44.1 CTCACACTAAGAAAATCCCCAG CAGTTCTCTGATCTGCCTTCTC 415 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST20F2 EST cfa15 38 4447 44.5 AAGAATCTATTCCCCTGGAGTTCTA TTCCCAATTCTGAATGTTAATATGG 141 NA NA AJ537149 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH3689 Microsatellite cfa15 39 4471 44.7 ATGCTTCACCCTTACTCTCAAG ACTCTGACAACGAATTGTGATG 498 0.66 0.6 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH2171 Microsatellite cfa15 40 4513 45.1 CTATGCCACTCTAGATTCTGGG ACACATGCAGATAGGTCCTGG 644 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
EST13H11 EST cfa15 41 4537 45.4 GTTTGATTTAATTTGATTTGCCTGA TGGTTTTGAAACAACTGTTTAATTTT 156 NA NA AJ537144 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
STS122I11 SNP,STS cfa15 42 4635 46.4 AGCAGAGTGGAAAGATAAACTGCTA TCCCCATAACAACCTCTAACATCTA 604 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH2017 Microsatellite cfa15 43 4785 47.9 AGCCTCTATAATCACGTGAGCC CCCAGTACCACCTTCAGGAA 268 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN159B09 Microsatellite cfa15 44 4827 48.3 GCGTCCCAGGAATCATTGT AGAGGCCTACCACGTTAGCA 152 NA 0.66 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN134K05 Microsatellite cfa15 45 4899 49 CTCCCAGTGGACATTTGAC TGTTGTAGAGGCTGTCCTG 173 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN303E22 Microsatellite cfa15 46 4984 49.8 GGTTGTTGCACGCTAAATCA CCAGGTCATGGAGAGGGTAA 366 NA 0.72 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
RVC1 Microsatellite cfa15 47 5042 50.4 TCACTGCATATAGAATTAGG CCAATAGGCTGTGAGTGAAA 158 NA NA NA Molyneux & Batt., 1994 (Animal Genetics 25, 379)
REN143N23 Microsatellite cfa15 48 5114 51.1 CAGACGGACGACTGCTGATA GAGCGTGTGTACATGTGCGT 190 NA 0.66 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
CPH4 Microsatellite cfa15 49 5198 52 ACTGGAGATGAAAACTGAAGATTATA TTACAGGGGAAAGCCTCATT 118-150 NA NA NA Fredholm & Wintero, 1995 (Mammalian Genome 6, 11-18)
UOR0442 Microsatellite cfa15 50 5283 52.8 TCAGCTGGTTAATGATAGGTGG ATATTCCTTTGCTCTGAGACGC 224-240 NA NA NA Meeks-Wagner in Neff et al., 1999 (Genetics 151, 803-820)
EST11D7 EST cfa15 50 5283 52.8 GTGTGTCAGAGCACAGTGTGAG TGATACCACTAGTCACATGCTTCAT 153 NA NA AJ537143 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
AHTH17REN STS cfa15 51 5369 53.7 TAGAGTAAGGGGCTGAAACATCACA ATGGAACCAGAGAACACTTTGGAA 237 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
EST17E11 EST cfa15 52 5488 54.9 TATGGGAACACAGATGAATGTGATA GAAGCAATTCTTCAAAAATAGAGCA 180 NA NA AJ537148 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH2295 Microsatellite cfa15 53 5624 56.2 TCTCGGGGATAGTGTTATAACTCC GTCAGGAAAAGGACATTTGACC 390 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
IGF1 Gene cfa15 54 5708 57.1 AGCCCACAGGGTACGGCTC CTTCTGAGCCTTGGGCATGTC 179 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
TRA1 Gene cfa15 55 5814 58.1 TTTGTTGAGCGACTTCTGAAAA GCAGAGGCTCAAATTCTTTCTC 196 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN230G12 Microsatellite cfa15 56 5952 59.5 AGTGGCTTTCCCTCCTCATT CATTGCAGTGCATACTTGCC 376 NA 0.5 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN193M22 Microsatellite cfa15 57 6074 60.7 CCATTGGCCATGTATCCTTC GAGGATGTCATCACTGGCTCT 205 NA 0.62 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN66E15 Microsatellite cfa15 58 6205 62.1 ATATGGGTACAATTCCTCTGG CCTGCTGGGGTAAGTATGTA 132 NA 0.48 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN01N09 Microsatellite cfa15 59 6277 62.8 CTTCCAACTCTACCACCAC GCCATCATTAACCTCATTT 147 NA 0.49 AJ391558 AJ391559 Jouquand*, Priat* et al., 2000 (Animal Genetics 31, 266-272)
EST5H10 EST cfa15 60 6319 63.2 TAAATGATGGAAAATTTCAACACAG ATCCTCTTGATAAAGCAATGTAACG 205 NA NA AJ537154 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_380-J2 BAC cfa15 61 6376 63.8 TTCTCCAAGAACTCCTCATCAC GAGAAAGGTGCCACTATGATTC 171 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_382-K19 BAC,Microsatellite cfa15 62 6483 64.8 TTACTGTTAGCCCTGTCTTGTG TAAAGATCCACATAAACGTGCC 145 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN123N11 Microsatellite cfa15 63 6611 66.1 CTGGCACATAGGAAGTC TGAGAGTAGGATAAAAATAAT 241 NA 0.68 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH2088 Microsatellite cfa15 64 6683 66.8 CCCTCTGCCTACATCTCTGC TAGGGCATGCATATAACCAGC 117 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
EST17A4 EST cfa15 65 6707 67.1 CGGGTCTCATAACCAAAGTTAAATA TATGGCTTATCAGACAGGGATTTAT 189 NA NA AJ537147 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_382-E15 BAC cfa15 66 6748 67.5 ATTAAACCATCAGTTTGTTGGC GAACAGAAGCTAATCCACGTTC 404 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
C03509 Microsatellite cfa15 67 6771 67.7 CATTCTGCTCATCTCCATAAG GGCACAACTAACTCATTTCTAT 188 NA NA NA Yuzbasiyan-Gurkan et al., web site
FGA Gene cfa15 68 6812 68.1 TCCTGGGGACTACAAGAGCCAG GTGGAGCTCCCAGGGTTCCT 180 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FGG Gene cfa15 69 6835 68.4 GAAGCAAAGTGTCAGGAACCTT ATTTCCAGACCCATCAATTTCA NA NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH2360 Microsatellite cfa15 70 6876 68.8 CATTGATGCTGAATTTGACTTC TTACACACACTATTTTGCTGGTCA 315 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH3903 Microsatellite cfa15 71 6899 69 GGAGAAAGGAAATACAGAACCC CCTACTCCTAACTAAGGCTCCC 359 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST9H3-B EST cfa15 72 7004 70 CATTGGTTGTGTATAAAGGCAATAA GATTAATGCAAATAGGCATCTAAAAA 189 NA NA AJ537157 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
BAC_385-E15 BAC cfa15 73 7061 70.6 ATCACAGGAATGAATAGGCAAG GATGAGACATGCAAATATCCAG 376 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
REN204N22 Microsatellite cfa15 73 7061 70.6 AGGAAAAACACATTTGGATGG TCTTGCTGTTTGCTGCAGTT 277 NA 0.62 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
BAC_372-I11 BAC cfa15 74 7085 70.9 TGAATAAAATATTACCCACTGGCA GTAGATACTGACATGTTCCGTTGG 280 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH2278 Microsatellite cfa15 75 7170 71.7 TCCACTCTGAGCATGGAGC GCCCAGTTTTCCCAGTAACA 322 NA NA NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
REN144M10 Microsatellite cfa15 76 7212 72.1 TCTCATGCAAATCTTCGTTCA GCCACCTCATTCCAAAAAGA 211 NA 0.66 NA Breen et al., 2001 (Genome Res. 11, 1784-1795)
FH3256 Microsatellite cfa15 77 7253 72.5 CGCTTAATGTAACCCAGTGC GCCTGGGTAGTTCAGTTGG 592 NA NA NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
EST27A10 EST cfa15 78 7324 73.2 AGAAGAGAGAACTTTCTGTGCGTAG CAAGAAAGACATGTTTTGGTCATTT 105 NA NA AJ537151 Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
AHT139 Microsatellite cfa15 79 7382 73.8 TCTGGTGTGTTTGAGTGAGC ATGCAGCTCCTGGCACAG 150-158 NA NA NA Holmes et al., 1995 (Animal Genetics 26, 132-133)
FH3283 Microsatellite cfa15 80 7439 74.4 TGTTGTTGAATATAGACTCTGGTC CATGCTTAGCAAGGATTTGG 424 0.59 0.58 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)
FH3939 Microsatellite cfa15 81 7523 75.2 CTTTGTCACGTTTGTCTTGG CCTTCTCCTCCTATCTCTCAGG 263 0.86 0.85 NA Guyon et. al., 2003 (PNAS 100{9}, 5296-5301)

 

 

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