Canine Chromosome 12 (Guyon et. al. 2003)
| Marker_Name | Marker_Type | Chromosome | Position_Number | Position_TSPunits | Position_Mb | Forward_Primer | Reverse_Primer | Product_Size | HET | PIC | Accession_Number | References |
| TNF | Gene | cfa12 | 1 | 0 | 0 | TACTCCCAGGTCCTCTTCAAGGG | TCAGCGCTGAGTCGATCACC | 230 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| FH2200 | Microsatellite | cfa12 | 2 | 75 | 0.7 | CATGATCCTGGAGTCCCG | GAAAGCTGCTTCAGTGGACC | 462 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| DLA-A9 | NA | cfa12 | 3 | 119 | 1.1 | AACAACCCTGGCTTGTCTCTGC | TCTCCTGGACAGGAAAGCACATC | 158 | NA | NA | M32283 | NA |
| DLA-88 | Gene | cfa12 | 4 | 235 | 2.2 | CTGATGTGCTTTCCTGTCCA | CAGCCTCACATCCCAAGACT | 60 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| HUEST-L03411 | EST | cfa12 | 5 | 376 | 3.5 | GCAGGTCGGATTCATTC | CCATCTTTTCATAGGTGACG | 177 | NA | NA | NA | Priat*, Jiang* et al., 1999 (Mammalian Genome 10, 803-813) |
| DLA-DRB1 | NA | cfa12 | 6 | 539 | 5.1 | CCTTTCCAGCTTCTTCTCAGAGTCC | AAGGTACTGCAGTCAGCACTGGG | 183 | NA | NA | M29611 | NA |
| STS309N24 | SNP,STS | cfa12 | 6 | 539 | 5.1 | CAATTTTTCCTTTTTATTGCTGAGA | ATTACAAAATGGGAGAAAGACACAA | 472 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH2202 | Microsatellite | cfa12 | 7 | 600 | 5.7 | GTTGAGTGGTTGCCTTTAGC | CAGGATCTTCATATGTCACC | NA | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| DLA-DRA | NA | cfa12 | 8 | 676 | 6.4 | ACCCCTGTGGAACTGGGAGAG | CATCCAAACCCCAGTGCTCC | 232 | NA | NA | L37332 | NA |
| DLA-DQA | NA | cfa12 | 9 | 720 | 6.8 | GGTTCCTGAGGTGACTGTGTT | CCCCAGTGCTCCACTTTG | 252 | NA | NA | M74910 | NA |
| EST2A7 | EST | cfa12 | 10 | 847 | 8 | AAAGGAATGTGGAAGAAACTGC | TGGCAAGATACAAGACTCCACA | 122 | NA | NA | AJ537111 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH2789 | Microsatellite | cfa12 | 11 | 1048 | 9.9 | GGGAGAAACTGGAAGAGGAG | GATATGCCCACAAGATCACC | 182 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN258L11 | Microsatellite | cfa12 | 12 | 1136 | 10.7 | TTCTCTGTGTATGTGTACGCTTG | ACACCAAATGTGTGAAGGCA | 280 | NA | 0.72 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| STS75K21 | SNP,STS | cfa12 | 13 | 1239 | 11.7 | CCAGATGCTTGTATCTTAGTCCTGT | AGTCCTTATAAATGACTCCTGCCTT | 548 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_375-O8 | BAC | cfa12 | 14 | 1299 | 12.3 | TAAATTGTTAAGAGGGAGAGAGCTG | GGTGGAAGCACTCTGTTTACACTAC | 208 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH2975 | Microsatellite | cfa12 | 15 | 1359 | 12.8 | TGAACCAATTGAGGAACACA | TGGGGTCTTGAGTTTGAGTC | 323 | 0.77 | 0.75 | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| CLPS | Gene | cfa12 | 16 | 1473 | 13.9 | CTGGGCCTCGGGTTACGTC | GACCACCGCAAGGGCAAC | 196 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| C07003 | Microsatellite | cfa12 | 17 | 1606 | 15.2 | GAGCCTGCTTCTGCCTCTCC | GTATTAATGGATGGATTGCA | 156 | NA | NA | NA | Yuzbasiyan-Gurkan et al., web site |
| REN170E21 | Microsatellite | cfa12 | 18 | 1788 | 16.9 | GCAGCAATTAGCCACAATAGC | CCCTACCCCTTAAATTCCAA | 284 | NA | 0.59 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| REN113P22R | Microsatellite | cfa12 | 19 | 1976 | 18.6 | ACCCACCTGTCAAGATTC | GCCGCCATGTCCATTAGTTTT | 210 | NA | 0 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| REN153O12 | Microsatellite | cfa12 | 20 | 2090 | 19.7 | CCAACCTTGGGTCACTTTTC | GTGTCTTTCCCTGAGCATCC | 213 | NA | 0.76 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| REN242J05 | Microsatellite | cfa12 | 21 | 2193 | 20.7 | TCATTTTGGAAGCTATGCCC | CTGAGACCACACAGCTTGGA | 284 | NA | 0.42 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| REN211B14 | Microsatellite | cfa12 | 22 | 2342 | 22.1 | TGCTTGTGGTGAGGTCAGAG | CCAGCGTGCCTACGTAATGT | 121 | NA | 0.46 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_372-K13 | BAC | cfa12 | 23 | 2456 | 23.2 | TATATCCAGGGAATTTGGAAAGAAT | GAAGAATTTGTCCCAAGTTAGGAAG | 197 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH3999 | Microsatellite | cfa12 | 24 | 2499 | 23.6 | AATGAGGGCATAGTGAAAAGAG | AATTTGTTAGCACACCTTTTGG | 342 | 0.62 | 0.6 | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH2152 | Microsatellite | cfa12 | 25 | 2542 | 24 | ACCCCTCTTCATGCTCTCTG | AGCATATCAGTAGGGAAGGGAG | 433 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| RDS | Gene | cfa12 | 26 | 2630 | 24.8 | GGTGTGTCCAACCCTGAAGACC | TGGTTACTCTTGCCCAACTTTTTCA | 119 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| GNMT | Gene | cfa12 | 27 | 2717 | 25.6 | GGGAGGGAGCAGCATGGTGCGGTCA | GTCGCTCTGTAGGTAGTGGTGCAG | 225 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST11G5 | EST | cfa12 | 28 | 2776 | 26.2 | TACAGGTTTTAATGACTCTGCACTG | TCACCAAGTAAGAAGATTGCTTAGG | 199 | NA | NA | AJ537099 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST3C8 | EST | cfa12 | 29 | 2850 | 26.9 | GGACAACTCTACAATGGGCTATATG | CTAGCTTGATCATGCGGTAAATG | 224 | NA | NA | AJ537112 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_375-C18 | BAC | cfa12 | 30 | 2924 | 27.6 | ATGCAAGCCTGGTATACCTTC | TATGTGAAAAGAACTGTCACGG | 267 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST15C11 | EST | cfa12 | 31 | 2948 | 27.8 | CAAATCTGTGGTTTTTCAGTTGTTT | GAGTTTACTCACAGGCAGCACTTTA | 205 | NA | NA | AJ537102 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN262L10 | Microsatellite | cfa12 | 32 | 2972 | 28 | CTTCACTGCTCCAGAGGACC | AATGGCAGAGCTGGGATATG | 359 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| REN262I12 | Microsatellite | cfa12 | 33 | 3096 | 29.2 | GACAGGGCTCTCTGACAAGG | CTTCACTGCTCCAGAGGACC | 157 | NA | 0.48 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| EST29H5 | EST | cfa12 | 34 | 3281 | 31 | TTTAATGCAATCTTTTCACAGCTTA | TTGAAAAGAAAACCCATTCACTAGA | 105 | NA | NA | AJ537110 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST28A4 | EST | cfa12 | 35 | 3395 | 32 | GCGTTTAAGAAATATTTTCTGTGTGA | AGAAATCTAAGAATGGCAAAGCATA | 195 | NA | NA | AJ537109 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN213F01 | Microsatellite | cfa12 | 36 | 3419 | 32.3 | CATTCTGGGCAGGTTTCATT | GGGGACAAATTTCCACTCCT | 265 | NA | 0.82 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| PLA2G7 | Gene | cfa12 | 37 | 3492 | 32.9 | TAGGCTATCCCATAAAAGTGATTGA | ATTAGCCTTGTGCCTGTTATACTTG | 180 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_375-M24 | BAC,Microsatellite | cfa12 | 38 | 3566 | 33.6 | AGTATTTTCTGGCTCAGGGATG | ACTGTGTTTAGGGAGATTGTGC | 279 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN194P02 | Microsatellite | cfa12 | 39 | 3625 | 34.2 | TCTAGGCAATGCAAAAAGGC | ATTCAGCTGTTGAAGGGCAT | 363 | NA | 0.66 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_385-C5 | BAC | cfa12 | 40 | 3668 | 34.6 | ATTGAGTCCTCTGAGATTTTGG | CTGTCACTCACTGGTCTCTCTG | 398 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_373-E24 | BAC | cfa12 | 41 | 3742 | 35.3 | AATCAGTCCCTCTCTCTTAGGG | CCTCATCTGTCTTCTTTATGGC | 155 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH3601 | Microsatellite | cfa12 | 42 | 3922 | 37 | TTGGTGAATATTTGGGTTGC | GATTCTGCAATCCCATTCC | 191 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_372-E21 | BAC | cfa12 | 43 | 4009 | 37.8 | CTGACTGAAATTTTCCTATCCACTG | CGACAACACACAGAGCAGTACG | 216 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST14A1 | EST | cfa12 | 44 | 4068 | 38.4 | AAGCATACTGTAGCAACTCGTTTGT | TTCAAATTCACATTAGCACAGTGTC | 205 | NA | NA | AJ537101 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| 206-11 | Microsatellite | cfa12 | 45 | 4111 | 38.8 | TGTTTCCAAGAAAGAACACTGG | TATATTCTGTTCTGCTTGGGGC | 170 | NA | NA | NA | Li et. al., Genomics 73, 299-315 (2001) |
| FH3711 | Microsatellite | cfa12 | 46 | 4170 | 39.3 | CTTGAACCTGTTATCTGATTTCC | GGAGGAGTTAAATCTCAAAACC | 238 | 0.89 | 0.88 | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| 1-26-17 | Microsatellite | cfa12 | 47 | 4194 | 39.6 | TCTGATTCCAGTCCTTCCTGAG | TGATTGATGTCAAGGAAGGTGG | 230 | NA | NA | NA | Li et. al., Genomics 73, 299-315 (2001) |
| 34-1 | Microsatellite | cfa12 | 48 | 4253 | 40.1 | ACAGCCTTTCAATTAATTTGCC | TGGAACAAAAAGAAATTTGCAC | 120 | NA | NA | NA | Li et. al., Genomics 73, 299-315 (2001) |
| 1-16-14 | Microsatellite | cfa12 | 49 | 4340 | 40.9 | AGGATCAAGGATTGGAAAGTCC | ATAAATCCCACGAATGTCAGTG | 200 | NA | NA | NA | Li et. al., Genomics 73, 299-315 (2001) |
| 26-12 | Microsatellite | cfa12 | 50 | 4439 | 41.9 | TAATCTGATTTTCCTGGAATCA | GGAGGCATAAATGCTAGGAAG | 228 | NA | NA | NA | Li et. al., Genomics 73, 299-315 (2001) |
| C05101 | Microsatellite | cfa12 | 51 | 4497 | 42.4 | CTCTTAACCGACCTTGACACC | AGAACTTGCTTATGAAGTCATGT | 208 | NA | NA | NA | Yuzbasiyan-Gurkan et al., web site |
| 6-28-6 | Microsatellite | cfa12 | 52 | 4521 | 42.7 | TACTATTGCAGTTGGCATGCTG | GCATTACTTTGATACCAAACCC | 313 | NA | NA | NA | Li et. al., Genomics 73, 299-315 (2001) |
| 3-14-2 | Microsatellite | cfa12 | 53 | 4545 | 42.9 | TCACAGGTTTCCCAACATTCTG | GTTTGTCACCCTCAGAAGCATG | 126 | NA | NA | NA | Li et. al., Genomics 73, 299-315 (2001) |
| 530-3 | Microsatellite | cfa12 | 54 | 4588 | 43.3 | AAATGTCTAATCACTTTGCCCA | CAAATCATGTCTAATAAGGGGC | 150 | NA | NA | NA | Li et. al., Genomics 73, 299-315 (2001) |
| 2-12-5 | Microsatellite | cfa12 | 55 | 4661 | 44 | CAAAGCAGCAGGGTACAAAATC | CTTGGGATACCCCCAGTACTCC | 212 | NA | NA | NA | Li et. al., Genomics 73, 299-315 (2001) |
| FH2054 | Microsatellite | cfa12 | 56 | 4747 | 44.8 | GCCTTATTCATTGCAGTTAGGG | ATGCTGAGTTTTGAACTTTCCC | 151 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| 1-21-3 | Microsatellite | cfa12 | 57 | 4820 | 45.5 | TGTTATGAAGCACTTGTTTGCC | CTTGCCAATAAGTGGTAGATGC | 190 | NA | NA | NA | Li et. al., Genomics 73, 299-315 (2001) |
| FH3882 | Microsatellite | cfa12 | 58 | 4844 | 45.7 | TGTTGAGCTTCTGACTCTTGG | CTGGCTGACTCAAGTCTATGG | 412 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| 478 | Microsatellite | cfa12 | 59 | 4868 | 45.9 | CCCATTGGAGTCCAGTCTG | ATCCTGGTGCCAGACAGTAC | 270 | NA | NA | NA | Li et. al., Genomics 73, 299-315 (2001) |
| EST4G12 | EST | cfa12 | 60 | 4910 | 46.3 | ATTTCTGTCAACATCTGTTTCCATT | GTAAACAAAGTGCAGGAGTTGAAAG | 101 | NA | NA | AJ537113 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| 107-12 | Microsatellite | cfa12 | 61 | 4934 | 46.5 | TTGTGCACATCACTCTCAATCTC | GCCCCATCTGAATTTAAAAAGAC | 278 | NA | NA | NA | Li et. al., Genomics 73, 299-315 (2001) |
| 1-18E | Microsatellite | cfa12 | 62 | 5007 | 47.2 | AGAGGATTAAGGGAGGACTGTG | TGTTTTCCTTCTATTGCCAGTG | 170 | NA | NA | NA | Li et. al., Genomics 73, 299-315 (2001) |
| 220-D | Microsatellite | cfa12 | 63 | 5080 | 47.9 | GGTTGTGAGATTGAGCTTCACC | AATTCGATAAACGAGGGGAAGG | 300 | NA | NA | NA | Li et. al., Genomics 73, 299-315 (2001) |
| 212-1 | Microsatellite | cfa12 | 64 | 5153 | 48.6 | CCCTACTCTGCCCTGTCTGTAT | GGGTCCAGGGAAAGTCCTGC | 250 | NA | NA | NA | Li et. al., Genomics 73, 299-315 (2001) |
| 232 | Microsatellite | cfa12 | 65 | 5195 | 49 | GTTGTCATCATATCTGTATTAG | AAACGGAGGAAAGGTGTTCTAT | 200 | NA | NA | NA | Li et. al., Genomics 73, 299-315 (2001) |
| FH2401 | Microsatellite | cfa12 | 66 | 5237 | 49.4 | CTGATTCTGCCCATTGGG | ATGTAAGCTCTACTGGGGTACTGG | 220 | 0.85 | 0.84 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| 174-2 | Microsatellite | cfa12 | 67 | 5336 | 50.3 | AAAGGGGATTTTTGAAGAGGTG | AACCAGCACGTATTGTTCCATG | 120 | NA | NA | NA | Li et. al., Genomics 73, 299-315 (2001) |
| EST-CFZ97782 | EST | cfa12 | 68 | 5395 | 50.9 | TTGATTTCTGATGCACAACCA | TCATGCTTGGAGACCAGTTG | 257 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_373-C21 | BAC | cfa12 | 69 | 5516 | 52 | CCAAAATTGTGAATTTGGAAAG | AATGGAGGTGAAATTTAAGGTG | 340 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH3713 | Microsatellite | cfa12 | 70 | 5540 | 52.3 | TTTTTGTAAGGCAGATCTAGTGC | GAAGCCTGTTTATGATTTTTTCTC | 386 | 0.83 | 0.82 | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN45E22 | Microsatellite | cfa12 | 71 | 5613 | 53 | AAATAAAATGTTGACCACTAA | AGCCCTTCTGTAGTTGTATC | 159 | NA | 0 | AJ391646 | Jouquand*, Priat* et al., 2000 (Animal Genetics 31, 266-272) |
| BAC_374-M17 | BAC | cfa12 | 72 | 5672 | 53.5 | ATGAGGTGCTCCATAGTAGGTG | TGGTATCTTCAAATATCCCTGG | 187 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST18C3 | EST | cfa12 | 73 | 5730 | 54.1 | CACAAAGGATTTGCTGTAAGTCTTC | GAAATGAATACCTTGGTGCAGTTAT | 167 | NA | NA | AJ537105 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH3585 | Microsatellite | cfa12 | 74 | 5772 | 54.5 | CCAAACCTCTCATGGTTAAGG | GACTTAATAGCAAATCAACACAGC | 242 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_372-E5 | BAC | cfa12 | 74 | 5772 | 54.5 | GTGAAATTACTTTTACCCCCATTCT | ACAGCCAGTTTTATCTTTGGTATTG | 200 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN148F07 | Microsatellite | cfa12 | 75 | 5814 | 54.8 | GGCCTGCTAGCCCTATGTTA | AACCCCATGACATTTGCATC | 171 | NA | 0.38 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_373-C20 | BAC | cfa12 | 75 | 5814 | 54.8 | AGCTACAGAAGCTGCTAACTGG | TAAAACATAAGCTGAGGGGTTG | 331 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_381-E9 | BAC | cfa12 | 75 | 5814 | 54.8 | TTTTTGAGATAATCCGAGTAAAGCA | ACTACAACTAACTATGCTGCCTCCA | 184 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| N16 | NA | cfa12 | 76 | 5838 | 55.1 | NA | NA | NA | NA | NA | NA | NA |
| STS38K22 | SNP,STS | cfa12 | 76 | 5838 | 55.1 | CTTTCCTTTGGGGGTCTAATAATAA | TATTAGATTGAGAATGGGGCATTTA | 483 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| END5 | NA | cfa12 | 77 | 5862 | 55.3 | NA | NA | NA | NA | NA | NA | NA |
| E2 | NA | cfa12 | 78 | 5886 | 55.5 | NA | NA | NA | NA | NA | NA | NA |
| 2-3-1 | Microsatellite | cfa12 | 79 | 5959 | 56.2 | GTTTACTGAGTGGGTGGTCCTC | CTTGAATCCTGGTTCTGCACCT | 170 | NA | NA | NA | Li et. al., Genomics 73, 299-315 (2001) |
| HTR1B | Gene | cfa12 | 80 | 6057 | 57.1 | CAAGTCAAAGTGCGGGTCTC | GATAAAGGCTCCCAAGATGATTC | 108 | NA | NA | S82461 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_372-C2 | BAC | cfa12 | 81 | 6081 | 57.4 | TCTTTGTTGGGAAATTTTTGATTAC | AAGAAAGGGGAGACATTATAACCAC | 212 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST7C4 | EST | cfa12 | 81 | 6081 | 57.4 | CAAAAAGCACGACTATGAGAAGATA | AAGGCACAGAAAACTGAATCTGTAG | 206 | NA | NA | AJ537116 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| 141-7 | Microsatellite | cfa12 | 82 | 6105 | 57.6 | AAGGAGAGGGAAAAAATAGGGG | TCGATAAAAAATTACCAGCAAC | 170 | NA | NA | NA | Li et. al., Genomics 73, 299-315 (2001) |
| C00104 | Microsatellite | cfa12 | 83 | 6178 | 58.3 | TGACATAAGCTGTGAGAAGAC | ATTGAAACTGATAGAGAAGAG | 140 | NA | NA | NA | Yuzbasiyan-Gurkan et al., web site |
| EST10B10 | EST | cfa12 | 84 | 6236 | 58.8 | GGATTTATGGAAAGAAGAGTGTCCT | ATTAGTTTGCCAGGCTATCAGAAAT | 185 | NA | NA | AJ537098 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST5H8 | EST | cfa12 | 85 | 6260 | 59.1 | TCTTTTGCAGAATTATTCCTAGTGC | TGATTGTAGATCCAGTTACCACTGA | 199 | NA | NA | AJ537114 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| 30-4 | Microsatellite | cfa12 | 86 | 6284 | 59.3 | CTTGGAAATTCAGGGTACATGG | AACAGGGCATCCTTGTTTAACC | 200 | NA | NA | NA | Li et. al., Genomics 73, 299-315 (2001) |
| REN208M20 | Microsatellite | cfa12 | 86 | 6284 | 59.3 | TGCATCATTTGTGGGTGTTT | ATGGAGCATGGGTGAGAAAT | 318 | NA | 0.64 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| FH3591 | Microsatellite | cfa12 | 87 | 6308 | 59.5 | AACTGTCACACAATGTTACATCC | TCATTACTATGCAAAACTTCAAGG | 341 | 0.9 | 0.89 | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH3371 | Microsatellite | cfa12 | 88 | 6332 | 59.7 | TAGATGACCTCATGTTGCATTC | TTCAAGAGCATGAAGTTTTCAG | 498 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN160J15R | Microsatellite | cfa12 | 89 | 6440 | 60.8 | CATGGTAACTGCACTTGTGG | GGCAAATGCATGATGAAATG | 253 | NA | 0.46 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| 110M10 | Microsatellite | cfa12 | 90 | 6537 | 61.7 | CACTGGAAACCAAATACTGTTG | GGATGTCTTGAATCAAATTGCC | 230 | NA | NA | NA | Li et. al., Genomics 73, 299-315 (2001) |
| REN89A22 | Microsatellite | cfa12 | 91 | 6646 | 62.7 | CACAGAACTTAAAAACACATT | AAACACAACCCCACACG | 231 | NA | 0.58 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_381-J15 | BAC | cfa12 | 92 | 6688 | 63.1 | ATTCACAGGTTTTCAGTAACACACC | TCCAACGTAAATTCCAAACTAAAAA | 244 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST11H2 | EST | cfa12 | 93 | 6712 | 63.3 | GGAATAAGTGAATTGTGATTCTCCA | TTGAGAATGTGGGAAAAATAGAGAT | 100 | NA | NA | AJ537100 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| CGA | Gene | cfa12 | 94 | 6784 | 64 | GGGTCCCAGAAGTTTTCTAACAG | GGGCGGGCGGCCACAGCTATTCCTTT | 198 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN238J01 | Microsatellite | cfa12 | 95 | 6842 | 64.5 | AGTTCCTGGAGGTCAGGGAT | TTTTCATGCAATAAAGGACCC | 215 | NA | 0 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| CNR1 | Gene | cfa12 | 95 | 6842 | 64.5 | TTCTGATCCTTGTGGTTTTAATCAT | GTCTTAATGAGCTTGTTCATCTTCC | 94 | NA | NA | AY011618 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH2707 | Microsatellite | cfa12 | 96 | 6866 | 64.8 | CACGTGGGCTACCCTAAAG | CAGAAGCAACCAGGTACTGC | 208 | 0.68 | 0.65 | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| G01811 | Microsatellite | cfa12 | 97 | 6965 | 65.7 | TATGAGTTGGGCTCCTGGTC | CTGGGACAGTAACACACATTAGT | 197 | NA | NA | NA | Yuzbasiyan-Gurkan et al., web site |
| REN207J23 | Microsatellite | cfa12 | 98 | 7315 | 69 | AAGGAAAACAAGGCGCAAG | CATGACCTGAGTCGAAATCAA | 407 | NA | 0.58 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_373-O22 | BAC | cfa12 | 99 | 7401 | 69.8 | TGTTTTTCTGGAAGTTTCCTTTTC | TGGCACTATGCTTTAGAGTAACCA | 225 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH1040 | Microsatellite | cfa12 | 100 | 7451 | 70.3 | AATCCTTGTTCTTTGACTCTTCC | CTTAGAATCTCTGTTCTCAGATGG | 268 | 0.58 | 0.51 | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH3748 | Microsatellite | cfa12 | 101 | 7801 | 73.6 | TTTGTGTTCATAGGCATATTGG | AAGATCAGCATTTCCCTAATACC | 285 | 0.88 | 0.86 | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_372-A6 | BAC | cfa12 | 102 | 7872 | 74.3 | ATTCATGGAAAGCTTTGTGAAAAC | GGGGAAGAGCTCAATTAAAATGTA | 183 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_381-G14 | BAC | cfa12 | 102 | 7872 | 74.3 | TATTACCTCTCATGGTTCTTTGGAC | TAAGAAAGTGGACTCCTCAGATCAC | 239 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_382-O4 | BAC | cfa12 | 103 | 7944 | 74.9 | GAAACACAATGAAGAAAGAGCC | ATAAAACTGCAAAATACTGGGG | 356 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| PEZ5 | Microsatellite | cfa12 | 104 | 8002 | 75.5 | GCTATCTTGTTTCCCACAGC | TCACTGTATACAACATTGTC | 96-121 | NA | NA | NA | Halverson J. in Neff et al., 1999 (Genetics 151, 803-820) |
| REN157F07 | Microsatellite | cfa12 | 105 | 8044 | 75.9 | TGAGCGAGAGGGAGAGAGAG | TCCTTGCAGCTTGCACTCTA | 218 | NA | 0.74 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_374-M7 | BAC | cfa12 | 106 | 8068 | 76.1 | TATTGGTATCCCCACCTTACAG | TGAACACCTACTACGTGCAAAG | 149 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH2347 | Microsatellite | cfa12 | 107 | 8188 | 77.2 | TTAGCTCTTCTGATCTGTCCCC | TCTCTTTCCCACCCCTCC | 405 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_372-I13 | BAC | cfa12 | 108 | 8310 | 78.4 | TATGTACCTCCAACACGTTAATCCT | AGCAAACATAGAGAGAAAGACCAGA | 195 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN260I06 | Microsatellite | cfa12 | 109 | 8409 | 79.3 | CACCCTCCACACCTCAATCT | TGGACATTGGGGATGGTAAT | 258 | NA | 0.66 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_373-M4 | BAC | cfa12 | 110 | 8480 | 80 | GAGTGTTTCCATGAATAGCGTAAG | TTTTTAGGCTCCAATGAATACCAT | 219 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH3116 | Microsatellite | cfa12 | 111 | 8503 | 80.2 | GAGAAATCCTGTCATGTGCTG | CCTTTTCCCTTCTTTCCTTG | 192 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST16E7 | EST | cfa12 | 112 | 8527 | 80.4 | GTATGCCTTTCCCTACACATACACT | AACACCTATAAGCTTTGCCTAATCA | 224 | NA | NA | AJ537103 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST25C4 | EST | cfa12 | 112 | 8527 | 80.4 | AAAGAAATGCTTTGGAAAAAGTACA | CTGTTGTGCCTCTGATCTTTTCTT | 178 | NA | NA | AJ537107 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST6B12 | EST | cfa12 | 112 | 8527 | 80.4 | TCGCATACCAATAGACAGACTGTAA | GTATTTCCTAAGGTGACCATGATTG | 208 | NA | NA | AJ537115 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST20D5 | EST | cfa12 | 113 | 8569 | 80.8 | TGCATTCATTCTCTGTTGATATGAT | GGAATATTTTCTTTCCAGCCTACAG | 182 | NA | NA | AJ537106 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| AHTH127 | Microsatellite,STS | cfa12 | 114 | 8611 | 81.2 | ATCGACTTGTTCTTTGTCTCAGC | TTTGGATATGATGGGGAATTTA | 178 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_382-G21 | BAC | cfa12 | 115 | 8721 | 82.3 | AGAATAGGTGACTTTGTGCCAG | TTTCCTGGTAACATCAAAAGTG | 312 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST25D4 | EST | cfa12 | 115 | 8721 | 82.3 | TTTTGTAAAATATGGTGCTTTCACA | GTGGCACCAACTGTCTTATTTTACT | 169 | NA | NA | AJ537108 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| C12.406 | Microsatellite | cfa12 | 116 | 8779 | 82.8 | CTCAGGTCATGGGATCGAGT | GGCTGATTCTTTTATTTGCCC | 169 | NA | 0.44 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| TBP | Gene | cfa12 | 117 | 8920 | 84.2 | CCTTTCTCTTCTGGAGGAAC | CTGCTGGGATGTCGACTG | 140 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| REN234K01 | Microsatellite | cfa12 | 118 | 8978 | 84.7 | GGGAGACGCTTCCCAGTTAT | AGCCCCTCACTGGGTGTAG | 141 | NA | 0 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| REN94K11 | Microsatellite | cfa12 | 118 | 8978 | 84.7 | ATACCACTGTCCCTCCTCTTA | ATCCTGGTATCAAATCTATCA | 123 | NA | 0.56 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_373-O14 | BAC | cfa12 | 119 | 9002 | 84.9 | ATTTACCTATCAGCCATTCGTGTT | AGCACTAACAACTTCCATAGTTCC | 268 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN194D11 | Microsatellite | cfa12 | 119 | 9002 | 84.9 | CAACGACGGGTTTTAGCATT | GACGGAGAGGGGATATGGTT | 163 | NA | 0.34 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |