Canine Chromosome 11 (Guyon et. al. 2003)
| Marker_Name | Marker_Type | Chromosome | Position_Number | Position_TSPunits | Position_Mb | Forward_Primer | Reverse_Primer | Product_Size | HET | PIC | Accession_Number | References |
| REN164B05 | Microsatellite | cfa11 | 1 | 0 | 0 | TGGGATGTGTGTCATGTGTG | CCTATGCAGGGTAGGCACAT | 232 | NA | 0.5 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| AHT137 | Microsatellite | cfa11 | 2 | 149 | 1.4 | TACAGAGCTCTTAACTGGGTCC | CCTTGCAAAGTGTCATTGCT | 133-153 | NA | NA | NA | Holmes et al., 1995 (Animal Genetics 26, 132-133) |
| PROP1 | Gene | cfa11 | 2 | 149 | 1.4 | UNPUBLISHED SEQUENCE | UNPUBLISHED SEQUENCE | NA | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| CANX | Gene | cfa11 | 3 | 210 | 2 | TGAATGAACTGTAAGCACATCATGC | TGCAGTCAACTCTCAGCCAACC | 155 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| AHTH279 | Microsatellite | cfa11 | 4 | 327 | 3.1 | GCACATGCTCCATTAACCCC | CACTATCTCCTGGCCTCTTCC | 184 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_376-I17 | BAC | cfa11 | 5 | 469 | 4.4 | AATGTGGCATTTTCATCAGG | TGCATGGTTATTAGCATCTCAG | 169 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_376-H9 | BAC | cfa11 | 6 | 530 | 5 | GGCACTCTGTGAAGACTGAATAAAT | GACACAATGAGGTCAGGAGAAGT | 177 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_372-C10 | BAC | cfa11 | 7 | 634 | 6 | AAAAAGAAGTTAGGGTTAATTAGCACAG | GGGTTATTTTTAATGGGTGAATGA | 200 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN161P13 | Microsatellite | cfa11 | 8 | 764 | 7.2 | CTGCTTGGGATTCTCTCCCT | GGGGCTTTGCATTTAAACAA | 194 | NA | 0.48 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_373-G8 | BAC | cfa11 | 9 | 825 | 7.8 | AACCATGCCTAGACGTATGTTC | ATCTCATGGATGATAGAGTGGG | 185 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_373-I1 | BAC | cfa11 | 10 | 886 | 8.4 | TTATTTCTTCCTGATTCACTTTTGG | AAAATGAGTAGATGGAGGAATACCC | 203 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST20G11 | EST | cfa11 | 11 | 930 | 8.8 | CAGAACTTTGTAAAGGTGAGAAACA | GAAATTTTTGATACCATTTCTCGTG | 127 | NA | NA | AJ537093 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN181F15 | Microsatellite | cfa11 | 12 | 1033 | 9.7 | GAGAGGAGAACGTGCCTGTC | TTGATGTGGGTCATGGAGAA | 366 | NA | 0.54 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| FH3203 | Microsatellite | cfa11 | 13 | 1245 | 11.7 | GCCCAGAATTAGTAGAAAGAAGG | CTGGCATGTAATTGTTCATAGC | 488 | 0.78 | 0.77 | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH3288 | Microsatellite | cfa11 | 14 | 1420 | 13.4 | GCTCCACAAAGGACACAGG | CCAAGATGGGACTTGATCC | 372 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_373-K24 | BAC | cfa11 | 15 | 1532 | 14.5 | ATTTTCCTTCCCTACAGTTTGG | CTTTTCCTGCTATCCTCACTTG | 164 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_373-A20 | BAC | cfa11 | 16 | 1606 | 15.2 | AGTAGCAGAGGGAGGAATTAACAA | TAACTTCCTGAGCTAGCTTTTCTG | 200 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH2894 | Microsatellite | cfa11 | 17 | 1681 | 15.9 | AAGAATTTGCTCCTCACAGG | TGCTCCTTACAGCTGAGACC | 226 | 0.27 | 0.26 | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_381-I20 | BAC,Microsatellite | cfa11 | 18 | 1724 | 16.3 | TGCCTATCTAGGATTTGTCAGG | CAATAAAGGACTTGAGGAGGG | 307 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN207M19 | Microsatellite | cfa11 | 19 | 1799 | 17 | GCAACCTCCCAAACCACTAA | CCTTGCCAATGCTGGTTATT | 246 | NA | 0.56 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| STS154L15 | SNP,STS | cfa11 | 20 | 1983 | 18.7 | CACACACACATATTTGCCATTTATT | GGAACAGTAGCAAGGTGTAAGTGAT | 518 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH4031 | Microsatellite | cfa11 | 21 | 2117 | 20 | CTAGCTTATCCTTGGCCTCTC | CCAAGAAATAATGACAACAAGG | 321 | 0.82 | 0.81 | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST14G5 | EST | cfa11 | 22 | 2259 | 21.3 | CGTTTCATTTATCCTTCAAACCA | GGTTACCTGAAAAATTTGGAAGAA | 193 | NA | NA | AJ537087 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH2096 | Microsatellite | cfa11 | 23 | 2356 | 22.2 | CCGTCTAAGAGCCTCCCAG | GACAAGGTTTCCTGGTTCCA | 104 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| REN93F10 | Microsatellite | cfa11 | 24 | 2453 | 23.1 | TCTGACGTCCACCCCATCC | GAAGCAGCCAGAGCATCCT | 227 | NA | 0 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| REN286P10 | Microsatellite | cfa11 | 25 | 2526 | 23.8 | CACCCAGAGGTCTGCTTCTC | ACAGACAAAATGCCCAGAGG | 195 | NA | 0.32 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| EST27E10 | EST | cfa11 | 26 | 2678 | 25.3 | CCCAACTTCCTTAACATAAGGTAAAA | CCAGAAGTAAATTAACATTGGAAGC | 198 | NA | NA | AJ537096 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN296A21 | Microsatellite | cfa11 | 27 | 2830 | 26.7 | GTGTGTGCAAAACTGATGGG | ACTGACCCAGACTGACCAGG | 187 | NA | 0.34 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| FH2760 | Microsatellite | cfa11 | 28 | 2902 | 27.4 | TGAAACACTTAAAGCATCATCG | GCTGTGCTTCCTCTCATCC | 188 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH3952 | Microsatellite | cfa11 | 29 | 2926 | 27.6 | AACTGTGGCCTGTTTTGTAATC | TGAGCTTTCTGTTTTAGCTTGG | 390 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN242K04 | Microsatellite | cfa11 | 30 | 3023 | 28.5 | CAAGGGAAGGTCTGATTCCA | CCCTGGGGAATAGGTAGGAA | 322 | NA | 0.58 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| EST1G9 | EST | cfa11 | 31 | 3094 | 29.2 | TGTGTTATTTTGTGATTGATGAAGG | TTGCATTTTAAGGTGGAAGAGACTA | 172 | NA | NA | AJ537092 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| STS41D02 | SNP,STS | cfa11 | 32 | 3213 | 30.3 | TTTTGGCTATTAGGAGTAGTGATGC | TGAAATCTGACTTCTTCCTTAGACC | 429 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_385-C1 | BAC | cfa11 | 33 | 3332 | 31.4 | TGGGTTTAAATCTCAGTTTTGC | TCATCAAAACACTCCACAAAAG | 349 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN54C20 | Microsatellite | cfa11 | 34 | 3389 | 32 | ATATCTACCCTCTTCATCACA | CCCATTCAACTTGCCTAAAA | 221 | NA | 0 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| IL13 | Gene | cfa11 | 35 | 3541 | 33.4 | CTAAAAGGCTGCATTTGGTGTGT | CATCTTTATTTCTGGCTTCCAGTT | 115 | NA | NA | AF244915 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST11G12 | EST | cfa11 | 36 | 3612 | 34.1 | TGCAAGGACTAGACTTGGATAGAAC | TGTCGACGTTGTAAATTAGTGGATA | 208 | NA | NA | AJ537085 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_375-F21 | BAC | cfa11 | 37 | 3636 | 34.3 | GCGATAAGATTGCACACTACAATAA | CGGGTTAATGGAAAAATGATAAGTA | 234 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN89J24 | Microsatellite | cfa11 | 38 | 3766 | 35.5 | GCCAAGCCAAGATTCAAACT | ACACCCATCACTACCACCTCT | 186 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| REN142O09 | Microsatellite | cfa11 | 39 | 3914 | 36.9 | CAAACCTCAGGACTGGATGG | TCGCTGACTCATAAACGTGG | 264 | NA | 0.32 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| STS110F20 | SNP,STS | cfa11 | 40 | 3986 | 37.6 | ACATGCTTATCCTTAGGTTTAAA | TCATTTGAAATTTTGACTTTTGTTG | 370 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST15D6 | EST | cfa11 | 41 | 4138 | 39 | AACATCAGGGTGTGTTTTATTGC | AACCATGTTTAAAAGCTCATCATGT | 195 | NA | NA | AJ537088 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| C02712 | Microsatellite | cfa11 | 42 | 4339 | 40.9 | GCTTGGATGCTATTGGCTCAA | CAATGACTTGGGAAACTACATTC | 156 | NA | NA | NA | Yuzbasiyan-Gurkan et al., web site |
| EST5E10 | EST | cfa11 | 43 | 4424 | 41.7 | AAACTTAACCACAATCACCACATTT | CTGGGCTGTATTGCTAACTTACTGT | 206 | NA | NA | AJ537097 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN57H24 | Microsatellite | cfa11 | 44 | 4560 | 43 | AATTTTAGCCTGCTCTTGACC | TATATTGTACACCTGAAACTA | 237 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| FH2004 | Microsatellite | cfa11 | 45 | 4656 | 43.9 | CTAAGTGGGGAGCCTCCTCT | ACTGTGACCTACTGAGGTTGCA | 237 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_373-E16 | BAC | cfa11 | 46 | 4753 | 44.8 | TAAGGAATACCCAGCATTTCTC | AGCATGGTCTTGTGATTTTACC | 198 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_372-O3 | BAC | cfa11 | 47 | 4838 | 45.6 | TTTCACCCTTATAAACATTGCATTT | TAACGTGGGAGAAATAAGTGTATCC | 194 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_375-K7 | BAC | cfa11 | 48 | 4862 | 45.9 | AACTTCAATGAGACAGGAGGAG | TTGGGAGTAGAATGGTATGTCC | 264 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_372-K9 | BAC | cfa11 | 49 | 4946 | 46.7 | AAAATGATCAAGAGCCTGAGAAGA | TCTGTCTATCGTCTTTGATAAAGTGTC | 189 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH2710 | Microsatellite | cfa11 | 50 | 5043 | 47.6 | TTTGCAATAGCCAAGATATGG | CCAATTAAAACTGGGCAAAAG | 187 | 0.54 | 0.49 | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH2874 | Microsatellite | cfa11 | 51 | 5100 | 48.1 | AACTTCTGGCTTTCATACCG | TCTTCAAAGAAAACCAACAGG | 178 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH3319 | Microsatellite | cfa11 | 52 | 5141 | 48.5 | CAGTAAGTCTGTAGCCAGGCC | GTGGGCATGGAGTTGTCC | 596 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| FH2319 | Microsatellite | cfa11 | 53 | 5268 | 49.7 | GGAACACTGTATCCTCAGTGTCC | TGGGAAGGAAGGAAGTGTTG | 255 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| EST12E1 | EST | cfa11 | 53 | 5268 | 49.7 | GGATATAAAAACGCACTCTTGAGAA | ATCTTCGTGCAAATTAGGATTACTG | 202 | NA | NA | AJ537086 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| TYRP1 | NA | cfa11 | 54 | 5310 | 50.1 | NA | NA | NA | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST24D12 | EST | cfa11 | 55 | 5368 | 50.6 | GAAGGAACTTTCAGACTCCTCATAG | CTCAGTTTCCATCTGTTCCTCTTG | 103 | NA | NA | AJ537095 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN245N06 | Microsatellite | cfa11 | 56 | 5425 | 51.2 | TCCTCCCTGGAAAGGAAGAT | GGCAGGAAGGCAGACTGTAG | 175 | NA | 0.7 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_375-B3 | BAC | cfa11 | 57 | 5522 | 52.1 | CCTTTTTTGGGAGCGTCAG | GGGATCCATGAACTGTGTGA | 262 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH2982 | Microsatellite | cfa11 | 58 | 5564 | 52.5 | CATGACATTCTTGCTTTAGCC | GGGCAAAGGGTTTTCTAAGG | 361 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_381-N5 | BAC | cfa11 | 59 | 5636 | 53.2 | AGCTGACCTAAGAATTAAACCCCTA | AATTGCATTGAATCTGTAGATTGGT | 195 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN161D14 | Microsatellite | cfa11 | 60 | 5678 | 53.6 | GCTTTGGCTCCTTCATTTTG | TTGTCCCCATAGTACAGGCAG | 375 | NA | 0.72 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_381-N7 | BAC | cfa11 | 61 | 5736 | 54.1 | CATACCAATGAGGTGTTTCAGAGAG | TTTAGACGTAACTGCTTCCTCAACT | 193 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN105L03 | Microsatellite | cfa11 | 62 | 5778 | 54.5 | GGAATCAAAAGCTGGCTCTCT | GAGATTGCTGCCCTTTTTACC | 251 | NA | 0.85 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| IFNA2 | Gene | cfa11 | 63 | 5909 | 55.7 | ATGACAAGCACGCCCATGTAGTT | GGCAAGTGTGGGAACCGC | 192 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| FH2706 | Microsatellite | cfa11 | 64 | 5933 | 56 | ACCTGAGCCAGAAATGAATG | AGATCTGCAGCATAGATGTGG | 202 | 0.7 | 0.68 | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| IFNA1 | Gene | cfa11 | 65 | 5957 | 56.2 | ATGGAGAAAGTGCATAAGGGAAAGC | CATCGGGGATCCTGCAGG | 185 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| IFNA3 | Gene | cfa11 | 66 | 6014 | 56.7 | CAAACGCCCAGTGTCAGGG | TGTCTCCTTGTGGCTCTTTCCC | 198 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| IFNW1 | Gene | cfa11 | 67 | 6071 | 57.3 | CAAATACAAAAGAAAAGGCAACAAT | GCTCAGGCTATACCAAGATGATTAA | 224 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| FH3393 | Microsatellite | cfa11 | 68 | 6207 | 58.6 | GCATTCTCACCACCATGC | CCCACACCTGTCAGAATAGC | 318 | 0.92 | 0.91 | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN174P22 | Microsatellite | cfa11 | 69 | 6303 | 59.5 | CACTCATGCTTCAGCAAAACA | TGAAAGAGGACAATGCTCCC | 273 | NA | 0.42 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_376-M15 | BAC | cfa11 | 70 | 6345 | 59.9 | TAAATGTGTATGGGGATTAAATGGT | TCCAAATTAAGTTAAAAGGCAAATG | 192 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH2880 | Microsatellite | cfa11 | 71 | 6387 | 60.3 | TTTCCCTCTCTCCTTTTTCC | CCAAAAGTGTATTGACTGATGC | 248 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST17E6 | EST | cfa11 | 72 | 6445 | 60.8 | ATGGGCTGAGATTTTAAATTGATTA | CTGAAATTTTACTTAATCCACAGCA | 100 | NA | NA | AJ537090 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| C11.868 | Microsatellite | cfa11 | 73 | 6518 | 61.5 | AGTAGAGCACAGGGAGAC | AAGAGTATTTTCTTCCATATCC | 209 | NA | 0.65 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| EST18E5-B | EST | cfa11 | 74 | 6590 | 62.2 | TGAATGTTATGGTATGTTGTCTTTTT | TTATTTGAACTGGGACATATTGCAT | 216 | NA | NA | AJ537091 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| STS311A00 | SNP,STS | cfa11 | 75 | 6675 | 63 | TACAAAACACTATAAACAGCACGGA | TCACAATCTCAAGTGTGAAAACAAT | 682 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_381-H22 | BAC | cfa11 | 76 | 6772 | 63.9 | AGTGCCCAATATGTTCTAGGTG | GGCAGACAGAATTGATGAAATAG | 378 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN182P10 | Microsatellite | cfa11 | 77 | 7122 | 67.2 | TCCTTGAAATCAGCCTGAGC | GCACTTGCCTGGGATTAGAC | 344 | NA | 0.18 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_385-O3 | BAC,Microsatellite | cfa11 | 78 | 7249 | 68.4 | ATTTGTTTCACATTCCATTTCC | CACTCCAAATCTCTCTCTCCAC | 202 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH2019 | Microsatellite | cfa11 | 79 | 7346 | 69.3 | ACCCCCCTGATTTGCTTTAC | AGTCCCGGAATCGAGTCC | 198 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| REN253B05 | Microsatellite | cfa11 | 80 | 7418 | 70 | GAGGCTCCTTCTCCCACAG | CAGCAACCAGAAAGGGTTTG | 340 | NA | 0.5 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| FH3900 | Microsatellite | cfa11 | 81 | 7476 | 70.5 | GCGACCTATAGAAACTGACAGC | CATGCAGTATCACCTTGAACC | 387 | 0.79 | 0.77 | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN194N17 | Microsatellite | cfa11 | 82 | 7533 | 71.1 | GGTGGAGAAACTTGATGGGA | CCCCATGGAGACCATTCTTA | 271 | NA | 0.7 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| FH3724 | Microsatellite | cfa11 | 83 | 7574 | 71.5 | CATTCCTCTTCCTCATGAAACC | TAAAGTCATCATTGTGGTCAGG | 314 | 0.84 | 0.83 | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH3238 | Microsatellite | cfa11 | 84 | 7670 | 72.4 | GGGAGGTAAATTCTCAGTGG | CCTGGGCCTTGTATGTAGG | 296 | 0.81 | 0.8 | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST23C8 | EST | cfa11 | 85 | 7767 | 73.3 | AAGAGAGTTAACAGGGCAAGCAATA | ATTCATTGTAGAAAAATTAGGAAACAA | 100 | NA | NA | AJ537094 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_373-C5 | BAC | cfa11 | 86 | 7838 | 73.9 | GGCTCTGTCATGAGTCCCAG | ATCTAGTCTCCACATTGCCAGAG | 211 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN249L05 | Microsatellite | cfa11 | 87 | 7880 | 74.3 | ATGCTGAAGTCGTGCAGTTG | CAGAAGGAGGTCAAAGCCAG | 322 | NA | 0.42 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_382-G7 | BAC | cfa11 | 88 | 7964 | 75.1 | TGTTTGGGGCTACATCATATTC | ATGTTCTTTTCTCAAAGCCAAG | 320 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN277K01 | Microsatellite | cfa11 | 89 | 7988 | 75.4 | ATCGCTCTGCTCATCCAGTT | TGCACTGTGCTCATTTAGCC | 148 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| REN147O02 | Microsatellite | cfa11 | 90 | 8012 | 75.6 | CTCCTGTTTTCCGTGGTGTT | CCCTCCGAGCAAGTAGCATA | 241 | NA | 0.74 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| CFOR10D04 | Gene | cfa11 | 91 | 8129 | 76.7 | ACAGAAACTGTTCTTGCAATACG | GAGTCTTTGGACTTTGGCTT | 329 | NA | NA | AJ431478 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST15E10 | EST | cfa11 | 92 | 8212 | 77.5 | AGATCGTTTTACTGGGGAGTCATA | AGTGTTTGTCTTTCCTAATTGGTCA | 163 | NA | NA | AJ537089 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_373-M14 | BAC | cfa11 | 93 | 8296 | 78.3 | TGGTGTGTATCACATTTTTATTCAT | GAAACTCGAGCTTGGACATTTTT | 187 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_375-G21 | BAC | cfa11 | 94 | 8392 | 79.2 | ACACTGAAATTCGATTCTTTCC | TAATCACTATGGGGTATCCCTG | 260 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| C11.873 | Microsatellite | cfa11 | 95 | 8526 | 80.4 | CTGGCAGATTACAGGTAGC | GTTCTCCAAAGCACTCAT | 133 | NA | 0.81 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| REN174D18 | Microsatellite | cfa11 | 96 | 8608 | 81.2 | GTGAGTGGATGCATCTGGGT | AAGGCAGCAGTGATGGTTTT | 204 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| DTR11.4 | Microsatellite | cfa11 | 97 | 8714 | 82.2 | CCTCATTGAGTGTGAGGATT | ATTCATTTCATGTGTTGGGT | 343 | NA | NA | AJ237687 | Tiret et. al., Animal Gen. 30, 462-473 (1999) |
| BAC_381-F14 | BAC | cfa11 | 98 | 8810 | 83.1 | GTGTTATTCATTTGGCAAACAAC | AAATGGGAAAAGCAAATAACATT | NA | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH3065 | Microsatellite | cfa11 | 99 | 8851 | 83.5 | TGTCGTTTCTCCTTCATTCAG | AACATCCAAACCTTTCTCCAG | 186 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| LEI001 | Microsatellite | cfa11 | 100 | 8893 | 83.9 | ACAATGCCTCCAGTGTAAGG | GATCACGTGCTTATGTGCTG | 120-135 | NA | NA | NA | NA |
| AHTH155REN | STS | cfa11 | 101 | 8964 | 84.6 | CTGCACACCTACCCCAGAAT | CACGCACGTGCTTAAACATT | 123 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| C5 | Gene | cfa11 | 101 | 8964 | 84.6 | ACCTAAGTCACAAAAAGAAGGGTTT | AGAACATGGTGCACTGTTTATCTG | 148 | NA | NA | AF202069S1 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| DGN13 | Microsatellite | cfa11 | 102 | 9080 | 85.7 | GGAACCCTCAGCTGTTATATGC | GATCTAAGGGCTCCAGAACACC | 320 | NA | NA | NA | Mariat et al., 1998 (Animal Genetics 29,150-160) |