Canine Chromosome 9 (Guyon et. al. 2003)
| Marker_Name | Marker_Type | Chromosome | Position_Number | Position_TSPunits | Position_Mb | Forward_Primer | Reverse_Primer | Product_Size | HET | PIC | Accession_Number | References |
| SRP68 | Gene | cfa09 | 1 | 0 | 0 | CCAGGTCTGCATTGGCCC | ACGACAAAGTTCCGAGCTCCC | 247 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| GALK1 | Gene,Microsatellite | cfa09 | 2 | 72 | 1 | AATTGAGTTTTTGGGGTGCCTGAG | CAATGAGCTGAGATGGTGTAGTAG | 186 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| MYL4 | Gene | cfa09 | 3 | 422 | 5.7 | CTCTTCCTCTTCCCCTGCTT | ACAACCCAGGATGTCAGAGG | NA | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST17G11 | EST | cfa09 | 4 | 462 | 6.2 | CACCAAATGTCAATGTGTACTGG | AAAACTCCAAAATTTAAGTGCACAG | 101 | NA | NA | AJ537046 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_376-F17 | BAC | cfa09 | 5 | 472 | 6.4 | CCACTACACACAACATCTAGGAATG | TTTAAAACTTAAGACCCTGTGTTGG | 198 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| C03304 | Microsatellite | cfa09 | 6 | 512 | 6.9 | ATTGGCATCATTCCACTGGTCA | TGGAGGCAGCTTAAATCTCAACA | 95 | NA | NA | NA | Yuzbasiyan-Gurkan et al., web site |
| BAC_374-C19 | BAC | cfa09 | 7 | 522 | 7.1 | GTTTGAAAGAGTCAGGGGAAAGTA | TTCTCAATTCTCAACACAAATGCT | 225 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| ACE | Gene,Microsatellite | cfa09 | 8 | 552 | 7.5 | AGGTCACTGTCTGTACACGTAGTG | ACCCCCTGTGCACCTCATCACTTA | 84-100 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| DDX5 | Gene | cfa09 | 9 | 592 | 8 | AGGCCTGCTGACTGCATATT | GGGGAGTGAGTGCTCTGAAC | 205 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| GH1 | Gene | cfa09 | 10 | 632 | 8.5 | GCAGTTTCTCAGCAGGGTCT | GATGCCCAGCAACTAGAAGG | 334 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH2263 | Microsatellite | cfa09 | 11 | 663 | 9 | CATGTAGAGTGATTAGTTGGTCTTT | CTGAATATCCTCTGCCCTTC | 217 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| APOH | Gene | cfa09 | 12 | 756 | 10.2 | ATGCATCAGATGTAAAGCCATG | ATTTTTCCACCTTTCTTTATGTTCC | 104 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_372-G15 | BAC | cfa09 | 13 | 819 | 11.1 | AGGGAGGTATAAAGGGTTTGTG | ACAGGGGTGTTTGTCTGTTATC | 237 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH3596 | Microsatellite | cfa09 | 14 | 829 | 11.2 | ACATCAGGTGAAGAGCTTGC | GAAGTTGGCTGGGGAAGG | 278 | 0.78 | 0.76 | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| STS1B10 | SNP,STS | cfa09 | 15 | 869 | 11.7 | CATTGAAGGGACATAGAGTTGTTTT | TTATACCATATGTGGGTAAATCGAA | 404 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN198P23 | Microsatellite | cfa09 | 16 | 949 | 12.8 | TTGTACATTATCTGTTCTACCTCGG | TCTTCAGCAGGCCTTTTCTC | 132 | NA | 0.66 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| C09.173 | Microsatellite | cfa09 | 17 | 1009 | 13.6 | ATCCAGGTCTGGAATACCCC | TCCTTTGAATTAGCACTTGGC | 110 | NA | 0.78 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| KCNJ2 | Gene | cfa09 | 18 | 1069 | 14.4 | TATCTGGCGAATGAGATCCTCT | CGTTTTCGTAGCAAAAGGAGTT | 193 | NA | NA | AF277647 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| STS171C13 | SNP,STS | cfa09 | 19 | 1210 | 16.4 | ACAACCCAAATATCCAGCAACA | TTCACTCATTTAAAGCATACAGTGG | 508 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| RAB5C | Gene | cfa09 | 20 | 1280 | 17.3 | TAAGTGCCTCTTCACACAGCGC | CAGCTGGTCCATTGGGTCG | 111 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BRCA1 | Gene | cfa09 | 21 | 1330 | 18 | GAGTCCTAGCCCTTTCACCCATAC | GTGATGTTCCTGAGATGCCTTTG | NA | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| EST16C5 | EST | cfa09 | 22 | 1380 | 18.6 | TGGGATAATCAATTCTTGTCTTTTC | GGTTCTGACTATAACCAGCCTAATG | 196 | NA | NA | AJ537045 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH1014 | Microsatellite | cfa09 | 23 | 1451 | 19.6 | AGGCTATTAACCCCTGATCG | CGATGCCTTACTTAAACAAACC | 241 | 0.35 | 0.29 | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| STS1A05 | SNP,STS | cfa09 | 24 | 1511 | 20.4 | GTCATGATCTCAAGGGTCCTG | TGGCAACATCTACTTTTCTAGCTCT | 362 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| G6PC | Gene | cfa09 | 24 | 1511 | 20.4 | TTAGACAAAAGTGGTTTTTGAGTCC | CTTGCCCCTGTTTTTATACACTCT | 85 | NA | NA | AF295565 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN54L20 | Microsatellite | cfa09 | 25 | 1561 | 21.1 | CAGTAGGCTTCGTTTTGAGTG | AAGGGCCCATGTTGCTGAGA | 153 | NA | 0.66 | NA | Mellersh et al., 2000 (Mammalian Genome 11, 120-130) |
| REN144L19 | Microsatellite | cfa09 | 26 | 1601 | 21.6 | TGTCATCCTGCATCCAATGT | CAATTTACTTTTGGGCGTCA | 216 | NA | 0.59 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| RARA | Gene,Microsatellite | cfa09 | 27 | 1611 | 21.8 | CAGGGCAGGGCGGGTCAT | GAAGATCTGAAGAACTTAGAGGAG | 130 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| THRA | Gene,Microsatellite | cfa09 | 27 | 1611 | 21.8 | AGCAGCTCCCCTTCACAC | CCCGCCGGTTCCCCCACTAT | 180 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| ERBB2 | Gene | cfa09 | 28 | 1621 | 21.9 | TGTGACGTGGGAACTGATGAC | CTTCCAAGGCTCCTTTAACCATAG | NA | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| ZUBECA3 | Microsatellite | cfa09 | 29 | 1651 | 22.3 | TCAGGCCTTTGATGATTTCA | CAGGGCTGGCATTTATGTAAG | 200 | NA | NA | NA | Switonski et al., 1998 (Animal Genetics 29, 322-332) |
| GAS | Gene | cfa09 | 30 | 1691 | 22.9 | CGCCTGCTCTGAAGCTTCTTG | GGCCGAAGTCCATCCATCC | NA | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| KRT17 | Gene | cfa09 | 31 | 1701 | 23 | CTCAGGGGAATGGAAACAGA | GAGCTGGAGGAGGTGAACTG | NA | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_375-K14 | BAC | cfa09 | 31 | 1701 | 23 | GGAGTCAGAGATCGCCACCTAC | CTGTCATTTGTGCAATGACCTC | 167 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| KRT9 | Gene,Microsatellite | cfa09 | 32 | 1762 | 23.8 | TCATCACTTCCTGCTCCATT | TCTCATGCCACACGGAACCT | 320 | NA | 0.67 | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN75M10 | Microsatellite | cfa09 | 33 | 1833 | 24.8 | GCTGGGGCCTCCTCTTCTTC | GGCCCCACCTCCCCAATAC | 215 | NA | 0.74 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_373-O24 | BAC | cfa09 | 34 | 1863 | 25.2 | AGTAATAGGAATGACAGTAGCGGG | CTACAGGCTAAGCAACCCAAAG | 187 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_375-O14 | BAC | cfa09 | 34 | 1863 | 25.2 | AACTCATTCTATGAGGCCAATG | TAAGCCACACTTGTATTTCTGG | 195 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| HUEST-D29228 | EST | cfa09 | 35 | 1893 | 25.6 | GAATGTCTGAGAGGCTGCT | CACTTTTGTGTCCCAAGGTAA | 164 | NA | NA | NA | Priat*, Jiang* et al., 1999 (Mammalian Genome 10, 803-813) |
| G06401 | Microsatellite | cfa09 | 36 | 1975 | 26.7 | TGCTTCTCCTCTGTCTGTATCTC | CAGGTCCCCCTACACTAAGTG | 133 | NA | NA | NA | Yuzbasiyan-Gurkan et al., web site |
| GNGT2 | Gene | cfa09 | 38 | 2055 | 27.8 | GTCCAATCCTGTGGTCATCC | TTGTGTTGCCACTCTTCTCG | 158 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_375-C24 | BAC | cfa09 | 39 | 2075 | 28 | CAGTACTGCAAGTCGCACAG | TTGAGGTTTTGGAAAGTGTACG | 173 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH2700 | Microsatellite | cfa09 | 40 | 2105 | 28.4 | CTGGAGTGGGATCTCTAGGC | CTGCTCTCAGGAAACTCCAG | 227 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| COL1A1 | Gene | cfa09 | 41 | 2135 | 28.9 | CACCTCAGGAGAAGGCTCAC | ATGTTCTCGATCTGCTGGCT | 132 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| STS1A01 | SNP,STS | cfa09 | 42 | 2195 | 29.7 | CTCTGTAAAGAAGGGGCATTAAACT | CTGAAACTCGTTCCTCAGAAGTAAG | 591 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST26E1 | EST | cfa09 | 43 | 2245 | 30.3 | AGAAGGAAAAACTCCTTTGGTAAAA | CAAAAATGGCTTGGATTAAAAATAA | 145 | NA | NA | AJ537051 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST12G4 | EST | cfa09 | 43 | 2245 | 30.3 | AGGACTACTGTTCGAAGATTTTTGG | TGAGCTTTATACTTTCTCTATGCCACT | 113 | NA | NA | AJ537043 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH4059 | Microsatellite | cfa09 | 44 | 2275 | 30.7 | GGATCTGTGTTTCTTCGTTAGC | TTGATTAAAGAGCAGCTTAGCC | 396 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN126A15 | Microsatellite | cfa09 | 45 | 2305 | 31.1 | CTACAGGGCAGTTCCACTCTT | AAAGGGATTCAGGGAGGTTTG | 264 | NA | 0.7 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_372-K17 | BAC | cfa09 | 46 | 2365 | 32 | AGGGGAATAACCAATATGACATTTA | GATCAGGGAAATATCCACCATAGTT | 206 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN158J11 | Microsatellite | cfa09 | 47 | 2395 | 32.4 | TTCTTGCATGATTGCAGAGG | GGGTTTTATCCCGGTTCATT | 263 | NA | 0.54 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_375-B19 | BAC | cfa09 | 48 | 2435 | 32.9 | CATCTGTAGTGGGTTGAATACTGCT | GAGTTTTTGCCTCAGTTATCACATT | 198 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_372-O23 | BAC | cfa09 | 49 | 2495 | 33.7 | TTTAGGACCATGTAGACACCAAGT | TTTCACCTAGAGGCACCTTATTTC | 299 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_381-K1 | BAC | cfa09 | 50 | 2575 | 34.8 | CTATCTTTCACAGCTCCTCTCAAAT | TGGTTTGTCTCTTTTTGTTCTGAAT | 208 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH2248 | Microsatellite | cfa09 | 51 | 2615 | 35.3 | CAAGAAAAAGATCAAAGCAAACA | CCCAGTGTTGAACCACCTCT | 390 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| FH2186 | Microsatellite | cfa09 | 52 | 2655 | 35.9 | AGAGGGTCTACATGGATTCTGG | TAGAGTCTCAAACAATCCTGTGG | 358 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| REN217P11 | Microsatellite | cfa09 | 52 | 2655 | 35.9 | CAGGCTCTTGAAAAACAGGC | GGCACCACTGAACCACTTTT | 304 | NA | 0.42 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| EST5H2 | EST | cfa09 | 52 | 2655 | 35.9 | CCTTATACCCTGTCCAGTATTCAGA | AACCATTTTCTATTTGTGCAAACTC | 200 | NA | NA | AJ537056 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_372-K12 | BAC | cfa09 | 53 | 2675 | 36.1 | CTCCTGAGCTCATAGGCACATTAT | TCACTATTCCTTGTTGCCTTTACC | 239 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| MPO | Gene | cfa09 | 54 | 2736 | 37 | CTCTCTCCCAACTTCTGATGCTTC | AAACTTACCCTCAGGACCTGCAAC | NA | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST5A6 | EST | cfa09 | 55 | 2821 | 38.1 | TACAACTCCACACTTCAACAACAAC | CTGTCATTGTCCTGAAACCTATTTT | 202 | NA | NA | AJ537055 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST9A7 | EST | cfa09 | 56 | 2904 | 39.2 | TTGTGTTAACAAAGTACAGCACAGG | ATATGGAAAAATGACAGTTCACAGC | 198 | NA | NA | AJ537057 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| DT_1314 | NA | cfa09 | 57 | 2914 | 39.4 | NA | NA | NA | NA | NA | NA | NA |
| REN65C02 | Microsatellite | cfa09 | 58 | 2944 | 39.8 | TTCTTTTTATTTACCTACCC | ACACTTCATTATTCCTCAGC | 146 | NA | 0.66 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| FH2722 | Microsatellite | cfa09 | 59 | 3035 | 41 | CATCAGCCCTCATGTAAAGC | ATCTTTTGGCCTTCATCTCC | 206 | 0.8 | 0.79 | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_385-O5 | BAC | cfa09 | 60 | 3097 | 41.9 | GTAGTATTTGGGATCTGGCAGC | GATGTATTGCTTAGCATGAGCC | 407 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| C09.474 | Microsatellite | cfa09 | 61 | 3127 | 42.3 | TTAAGCCTTATTTTGTGTTGGG | TCCAGGAAGTGTCTGCAGG | 109 | NA | 0.78 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| REN145P07 | Microsatellite | cfa09 | 62 | 3167 | 42.8 | TGGAAAGGTTTGCACTCTGA | TCCAATTCTTTCTGGGATGC | 218 | NA | 0.66 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| CCL2 | Gene | cfa09 | 63 | 3187 | 43.1 | TCACCACATCTCTGGCTTCTCATG | ACTCTGCACACCCTCCACCAGAGG | NA | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_372-C21 | BAC | cfa09 | 64 | 3217 | 43.5 | AAAGGAGGATAAGCAGAAGGAAAG | AAGACAGATATCATCATCCCCATT | 170 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH3835 | Microsatellite | cfa09 | 65 | 3567 | 48.2 | TGTGCCAGGTTATTCATTGC | TCTTCCTCTGTCCCTCTCTCC | 247 | 0.8 | 0.78 | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN42F01 | Microsatellite | cfa09 | 66 | 3649 | 49.3 | CCAGTGCCAGGGAGAGTTT | GGGACATGCCTGCTGAC | 274 | NA | 0.34 | AJ391628 AJ391629 | Jouquand*, Priat* et al., 2000 (Animal Genetics 31, 266-272) |
| NF1 | Gene,Microsatellite | cfa09 | 67 | 3672 | 49.6 | TCCCAAGTGACGGTTAGAGC | CCAGTGCCAGGGAGAGTTT | 304 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_374-O11 | BAC | cfa09 | 68 | 3727 | 50.4 | AACTGCAGGAAACAAACTTAGG | ATCAGTTGCATACAACATCAGG | 122 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST4B6 | EST | cfa09 | 69 | 3782 | 51.1 | AAAAACAGATGAGCTAGACCCTTG | TCATACTAAAAGATGGGTTGTTGCT | 209 | NA | NA | AJ537054 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| ALDOC | Gene | cfa09 | 69 | 3782 | 51.1 | GTGGCGTTGTGTGCTGAAAATC | AAAGCCCTCCTAACCCTCTCCC | 171 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| CRYBA1 | Gene | cfa09 | 70 | 3862 | 52.2 | CTCAGGTTGTAGGGTACTGACCCCT | CTCCTCCATGATGGTCACATTCC | 140 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST27D2-B | EST | cfa09 | 71 | 3943 | 53.3 | CATGACAGATGAGTGTTCTCTGAAT | CAATGGGCTCTTGCTCTAACAC | 100 | NA | NA | AJ537052 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST11C1 | EST | cfa09 | 71 | 3943 | 53.3 | CTCCTAATAATGTTGGTTTTGTTGC | CCAAATATGCTGTGAGCTAGAAGTT | 188 | NA | NA | AJ537042 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN278L10 | Microsatellite | cfa09 | 72 | 3966 | 53.6 | ACTGTGGGGAGAGGACACAC | CCTCTAGACAAGAGCCACGG | 235 | NA | 0.8 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| FH3235 | Microsatellite | cfa09 | 73 | 4037 | 54.6 | TGTGAAAGGACTATAAAAATTCTG | TGTCCACTAGTCAACCATAACTG | 219 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| STS1B05 | SNP,STS | cfa09 | 74 | 4155 | 56.1 | CTCTGGGTTCAGACTTACAGGTTTC | CCTCCTTACATTGTTACTCTGATTC | 590 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN256F13 | Microsatellite | cfa09 | 75 | 4226 | 57.1 | ACCCTGGTATCCCTCAAACC | TTGACTTCTGGCTTTTGGCT | 181 | NA | 0.48 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| EST20A3 | EST | cfa09 | 76 | 4267 | 57.7 | GCGAAGAAAACTAGAGAAGTCAAGA | TTTTCAATCCATGCTGTTACAACTA | 141 | NA | NA | AJ537048 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| DTMT | Gene | cfa09 | 77 | 4336 | 58.6 | AGCCTGAGGAATAAAGACATGAAG | TGGGTAAGAGAAAACATCTGGAATA | 159 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| CFOR08H10 | Gene | cfa09 | 78 | 4391 | 59.3 | ATGCTTTGACTCATACAGTGGCTAT | CTGAGCCCAGACGCATATAACT | 330 | NA | NA | AJ431463 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST4A10 | EST | cfa09 | 79 | 4432 | 59.9 | GAAATATCAGATTCCCTTTCCATCT | GTGGAGGAATGACAGTATCACTTG | 194 | NA | NA | AJ537053 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| LEI-2D2 | Microsatellite | cfa09 | 80 | 4488 | 60.6 | CGAGACCACATTGGGCTCC | CCAGACGCTCTCCATGCCTC | 390 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| REN177B24 | Microsatellite | cfa09 | 81 | 4511 | 61 | GAGGAGCAGGTGAGGCATAG | GCTGCTCTCGATCAACACAC | 366 | NA | 0.74 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| STS120D19 | SNP,STS | cfa09 | 82 | 4567 | 61.7 | CCATGGGTGGCTTCCGGAAGACC | ATTAATAACCTCTGCTGGTCCTTG | 665 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST13H5 | EST | cfa09 | 83 | 4637 | 62.7 | CCTGGCTCAATAGATAGGGATG | GTTGGAAGAGAAATGCCTTGAC | 180 | NA | NA | AJ537044 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN114M08 | Microsatellite | cfa09 | 84 | 4707 | 63.6 | CATCATGGCAAGAAGGGTAAA | ATGTGGGGATGGGTGGACT | 164 | NA | 0 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| REN73K24 | Microsatellite | cfa09 | 85 | 4763 | 64.4 | AATAAAAGCAATCTCAACTC | TCGGCACACTACCTGGCAGTC | 203 | NA | 0.58 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| TSC1 | Gene | cfa09 | 86 | 4832 | 65.3 | GTGCACAGGCTACACTTGGGT | GAACCCTGAAAAATTCCACCA | NA | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| FS | NA | cfa09 | 87 | 4912 | 66.4 | NA | NA | NA | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| E04008 | Microsatellite | cfa09 | 88 | 5262 | 71.1 | GGTAGCCTGCTTCTCCCTCTG | ACCAGTGATTCCCTTCACCTG | 143 | NA | NA | NA | Yuzbasiyan-Gurkan et al., web site |
| SPTAN1 | Gene | cfa09 | 89 | 5331 | 72 | CCATGCTTGTTCAGCCGTTG | ATGCTCTTCCCCTTCCCCTG | NA | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST-CFZ97756 | EST | cfa09 | 90 | 5354 | 72.4 | TTCCTCCTACCTTCCC | TCCGAGGAATAGAGGG | 275 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| EST1A7 | EST | cfa09 | 91 | 5377 | 72.7 | TATGGGCATTGGCATAAGAATA | GTAAGCACAGCGCATCTCATTC | 108 | NA | NA | AJ537047 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH2885 | Microsatellite | cfa09 | 92 | 5433 | 73.4 | CTTTTAGGGTGCCTTCAACC | TGGATTATTAAGGGGAATTTAGC | 209 | 0.76 | 0.74 | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST20C10 | EST | cfa09 | 93 | 5489 | 74.2 | ATTATTTACAGATCCTGAGGTGCAG | CCTAATTGCTATTTCTCTTCCCTCT | 183 | NA | NA | AJ537050 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| AHTH183REN | STS | cfa09 | 93 | 5489 | 74.2 | TTATCAGGTGAGTCCAGTGTCATCA | TTTCTGATCCTTCAAGCCATAAGGT | 252 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| CFOR08A09 | Gene | cfa09 | 94 | 5545 | 74.9 | CTGCAACCCCTTCCACTATGA | AAAGTGCTTAATGACATGAGAGG | 154 | NA | NA | AJ431397 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_372-I12 | BAC | cfa09 | 95 | 5568 | 75.2 | ACCATAGACAATGCTGTCTGTCTG | TGCTCATCTCTGTGCTTAGCTACT | 191 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| GGTA1 | Gene | cfa09 | 96 | 5609 | 75.8 | GAAGAGGTGGCAAGACATCAG | TGGTAATAAAAATCCCCCTGG | 258 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| REN287G01 | Microsatellite | cfa09 | 97 | 5703 | 77.1 | CCCATAAGGACCACAGGTTTT | TTCCTAAGGCCCTCCTGATT | 187 | NA | 0.54 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |