Canine Chromosome 4 (Guyon et. al. 2003)
| Marker_Name | Marker_Type | Chromosome | Position_Number | Position_TSPunits | Position_Mb | Forward_Primer | Reverse_Primer | Product_Size | HET | PIC | Accession_Number | References |
| EST9A5 | EST | cfa04 | 1 | 0 | 0 | ATTGAAGTGACAGAAATGTTGCATA | GGTCAAGGGTTAAGACTTTCTGTAG | 175 | NA | NA | AJ536955 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| CHRM3 | Gene | cfa04 | 2 | 306 | 4 | GGTCTGTGACCTGTGGCTCT | AAAGAGATGACCCATGCCAG | 174 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_381-O11 | BAC | cfa04 | 3 | 479 | 6.3 | AAAGTACATTGAGGAAGCACTGAAC | CTCTCTTTATTTTGATCGTGAATGC | 203 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN298N18 | Microsatellite | cfa04 | 4 | 679 | 8.9 | AAAACATTTCCCTCCCATCC | ACACCCAAAGCTGCAGAGAT | 190 | NA | 0.76 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| STS148N03 | SNP,STS | cfa04 | 5 | 783 | 10.3 | ND | ND | NA | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| RYR2 | Gene | cfa04 | 6 | 859 | 11.3 | CAGTCTTGGACTCTTCAGACTCTTC | GGAAGTCACATCTCTCTTTTGTTTC | 100 | NA | NA | AF203021 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_372-C22 | BAC | cfa04 | 7 | 986 | 13 | TTATTGCACTTTTTCCTTTTGTGAC | GTTAAGCTAAAACCCCCACTAAAGA | 192 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_376-J5 | BAC | cfa04 | 8 | 1143 | 15 | AGTGTTCAGCTACAACACGGACT | AAGAGCGGGACTCTTAACTGACT | 206 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN303C04 | Microsatellite | cfa04 | 9 | 1167 | 15.4 | GAGAGGTCATTGAGCAAGGC | ACTGCTCTGGCTGTCGTTTT | 380 | NA | 0.5 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| EST-CFZ97754 | EST | cfa04 | 10 | 1300 | 17.1 | CGTGTCCTCCTTAATGCTCA | AAAAACAAACAGGAAGACAACCA | 110 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| EST22H10-B | EST | cfa04 | 11 | 1373 | 18.1 | GATGTTCTGCAGACACTCAAATTAT | TATGAGGTACTGCAAAGAAGGAAAC | 194 | NA | NA | AJ536940 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST5C8-B | EST | cfa04 | 12 | 1432 | 18.8 | TAATTATGATTTTTGCTGCTCCTTC | ATGAATGACTGCCACTGAAGATTA | 209 | NA | NA | AJ536952 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST22H12 | EST | cfa04 | 13 | 1475 | 19.4 | AGAAATTCATCAAAAACAGGAACAG | CTTATTACATGTGACAGGCAAATTC | 193 | NA | NA | AJ536941 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH2773 | Microsatellite | cfa04 | 14 | 1587 | 20.9 | AAGAGCATCCAGAAATGCAC | ATTCGACCAGTCAGAACCTG | 206 | 0.68 | 0.65 | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| AGD | NA | cfa04 | 15 | 1790 | 23.6 | - | - | NA | NA | NA | NA | NA |
| REN71L22 | Microsatellite | cfa04 | 16 | 1877 | 24.7 | CTTGGGGTCACCTGCTGTTCA | CCCCTTTGCTGGCTGCTTGTG | 118 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| FH2732 | Microsatellite | cfa04 | 17 | 1936 | 25.5 | GAAAGGGTGTGGATAAAGAGC | TGGCATATTCAACAAATTGC | 215 | 0.86 | 0.84 | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST12B1 | EST | cfa04 | 18 | 2127 | 28 | TGTGTTTTAAAGGGCATTTTTATTT | CCAGTGTATGGGTTTTTCATACATA | 128 | NA | NA | AJ536935 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN171H02 | Microsatellite | cfa04 | 19 | 2237 | 29.4 | TGTCCTCATATGAACGCAGG | GGTCAACACATTGGAGAGGTG | 281 | NA | 0.62 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| REN207M20 | Microsatellite | cfa04 | 20 | 2295 | 30.2 | GCAGGCAATCCAGAAATGAT | AGAGGAGTAGGATTTGGCCC | 369 | NA | 0.58 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_372-M7 | BAC | cfa04 | 21 | 2368 | 31.2 | GTTAAAGCACAACTCTTCACCC | ATGTCCTTCAATTTTGGTTGTC | 280 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST4A2 | EST | cfa04 | 22 | 2440 | 32.1 | GCTATTTTGAATTGCAACATTTCTT | AAGTCTTAAATAGGGCTTTGTTTGC | 201 | NA | NA | AJ536950 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_381-F6 | BAC,Microsatellite | cfa04 | 23 | 2525 | 33.2 | CTTCCAATGGTGCTAAGTCCTC | GGCCTGATCCTGGAGACG | 364 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH3310 | Microsatellite | cfa04 | 24 | 2623 | 34.5 | ACTTCTGTGTTTAAATCAGGGC | AGAAAGCACTATTGGGACTGTAG | 314 | 0.77 | 0.75 | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_374-G23 | BAC | cfa04 | 25 | 2695 | 35.5 | CTCCATAGCCTTGAAAATAAACAAA | AATAAAAAGCCTTGGTAAGAAATGC | 193 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| AHT120 | Microsatellite | cfa04 | 26 | 2737 | 36 | CCCACAATAGGAAAACACAC | TGAACTCGGTAGGCATTTGA | 74-78 | NA | NA | NA | Holmes et al., 1995 (Animal Genetics 26, 132-133) |
| FH2399 | Microsatellite | cfa04 | 27 | 2856 | 37.6 | TTCTCCCTCTGCTGGTGTCT | GGGGTACATAGTATCCAGCATG | 257 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_381-H2 | BAC | cfa04 | 28 | 3011 | 39.6 | CAATTTATAGAAACAGATTGGTGATTG | ATTTTCAGAGGTACAAGGTGATTTG | 300 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_99-C20(CDH23) | BAC | cfa04 | 29 | 3120 | 41.1 | NA | NA | NA | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| CUN50001 | NA | cfa04 | 30 | 3470 | 45.7 | NA | NA | NA | NA | NA | NA | NA |
| BAC_375-O3 | BAC | cfa04 | 31 | 3571 | 47 | ATATCACTGACAGCCTCAGCTC | TTCCATGTGTGCATATTCTTTG | 124 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_372-M12 | BAC | cfa04 | 32 | 3625 | 47.7 | AGTTTCCACACGTAACATTTCC | TCCAGAAATTACATTTGGTTCC | 250 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| STS189H18 | SNP,STS | cfa04 | 33 | 3714 | 48.9 | TAACCCAGAAACTATTGAACTCCAG | ATGCTTGTTCCTACTCAAAATTCAC | 446 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH2776 | Microsatellite | cfa04 | 34 | 3781 | 49.8 | GGAACAGATGAGAAGCATGG | CTGGGTGGTTCAGTAGTTGG | 226 | 0.54 | 0.49 | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST7F6 | EST | cfa04 | 35 | 3821 | 50.3 | GGGTAAAGGGGAACAAAAATAGTAA | AGTCTCCAGCTACAACCACATACAC | 143 | NA | NA | AJ536953 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN315G05 | Microsatellite | cfa04 | 36 | 3844 | 50.6 | TGTAACCACACTTGGGCATC | CATTTTGATTTGCCAAGGCT | 188 | NA | 0.53 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| C5ORF8 | NA | cfa04 | 37 | 3898 | 51.3 | NA | NA | NA | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH3106 | Microsatellite | cfa04 | 38 | 4009 | 52.8 | CAGGATCTGAAGACCACACC | AACACCACTAGGAGGGAACC | 202 | 0.65 | 0.62 | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST27D8 | EST | cfa04 | 38 | 4009 | 52.8 | GCTTTATTAAATGCTCAACTCGAAA | ATATCTTAACTCTGGGGACCTCCT | 187 | NA | NA | AJ536946 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| KIAA1191 | Gene | cfa04 | 38 | 4009 | 52.8 | CAGTGATTCCAGAACGCAAGTA | AGAATAAAAAGGCCCACCAACT | 199 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| FH2412 | Microsatellite | cfa04 | 39 | 4049 | 53.3 | GCTGGGGATTTATTCTGACC | AAATTAACCAAATGTTTGCAACA | 160 | 0.89 | 0.88 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_375-M7 | BAC | cfa04 | 40 | 4103 | 54 | CTTGTCCCCTTCTACAGACAAG | GGTCATCTAGGCTCTCATTCAG | 147 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH3873 | Microsatellite | cfa04 | 41 | 4170 | 54.9 | CACTTCTGCATTGCTTATGG | GTCAGCAATCTCTGATCATCC | 402 | 0.88 | 0.87 | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN73D12 | Microsatellite | cfa04 | 42 | 4260 | 56.1 | AGTATGTGGCTTTCTCTGC | TTTCTTCTCCACACCCATAAT | 250 | NA | 0.46 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_373-E13 | BAC | cfa04 | 43 | 4300 | 56.6 | TCGCCATAACCCTGATAATAAAAT | ACTAGGCCAACAGAGATTAGGATG | 192 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| AHTH137REN | STS | cfa04 | 43 | 4300 | 56.6 | ACTGCCCAGAGGAAGGAGAG | TGGTACATTTAGGGGCAACA | 202 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| REN74B13 | Microsatellite | cfa04 | 44 | 4369 | 57.5 | AGAGACCACAGCAATAGAGT | TAGCATAACACAGGGTAGG | 223 | NA | 0.64 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| C01305 | Microsatellite | cfa04 | 45 | 4410 | 58 | GCATGAGATAAGACACCACCTGTT | TTCATTTCCTGCCTCCTGTG | 136 | NA | NA | NA | Yuzbasiyan-Gurkan et al., web site |
| STS47D07 | SNP,STS | cfa04 | 46 | 4466 | 58.8 | AAGTCTAATAAAGAAAGAGGAAAGA | AATCAGACAATCAAAAGATGTCTCC | 679 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST28D5 | EST | cfa04 | 47 | 4521 | 59.5 | AAAAGGTTCTATGTGTAAGGGCTTC | TTCCTAACTCACTGTTTTCACACAC | 165 | NA | NA | AJ536948 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_375-I23 | BAC,Microsatellite | cfa04 | 48 | 4589 | 60.4 | ACAAGTAACATAGTAGGAAACCCTC | CCAGATAATGTTCTCCTGAACC | 325 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH2142 | Microsatellite | cfa04 | 49 | 4669 | 61.4 | GCTCACATGTGTGCATGC | GCACTCCATGAGGCAGGT | 294 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| EST11E12 | EST | cfa04 | 49 | 4669 | 61.4 | TTTCCACAGTATTTAAGATGGTTCC | CCCAAATCTTGAGAAATAACCACTA | 203 | NA | NA | AJ536934 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH2807 | Microsatellite | cfa04 | 50 | 4709 | 62 | TGACCATTTCCCTCTTATTCC | CATGCCTGGTAAAATTCTGG | 198 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_375-M20 | BAC | cfa04 | 51 | 4764 | 62.7 | AGAATTAGTCTCATAACCCCCACTC | TGGAGGACCAGAGAAGTTAACTAGA | 207 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN282C02 | Microsatellite | cfa04 | 52 | 4804 | 63.2 | TGAGATATGCTCCCCAAGAGA | CACCTTGCTCAAGGCACAT | 201 | NA | 0.76 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| REN156O17 | Microsatellite | cfa04 | 53 | 4859 | 63.9 | GGACAGATGGGCTTGGACTA | CTGGGGACTTCTGCCTTTTT | 262 | NA | 0.46 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_381-I11 | BAC | cfa04 | 54 | 4899 | 64.5 | GATTGGATGAGATATGGATACTTGA | TCTCAATTTAGATTGGCCATAGTTC | 195 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN195B08 | Microsatellite | cfa04 | 55 | 4953 | 65.2 | GCTTTCCCATTGTGTCCTCA | TGATTGATGCCCTTTCAACA | 136 | NA | 0.54 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| FH1015 | Microsatellite | cfa04 | 56 | 4975 | 65.5 | TGAAACTTTCTATTGCAACTTGG | TGCATGTGTGTTTCAACTCC | 270 | 0.61 | 0.58 | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH4018 | Microsatellite | cfa04 | 57 | 4997 | 65.8 | TGTTTCCAAGAATGGAAGAAAG | TAAGTCAGCGTGACATAACTGC | 329 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_374-E21 | BAC | cfa04 | 58 | 5036 | 66.3 | TCAAAGGCAAAATGGAGAGTTATAG | TTGGAAAATGGTAAAGCTACTTGAG | 204 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST8G9 | EST | cfa04 | 59 | 5074 | 66.8 | TTGTTTTGTTTTGGTTTTGAGTGTA | TTTCATGTGAGCTTAATGCAGAAT | 192 | NA | NA | AJ536954 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| ADRA1B | Gene | cfa04 | 60 | 5139 | 67.6 | GTACTGTCGCGTGTACATCGTCG | CAGCACAAGATGAACATACCGACC | NA | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| PDE6A | Gene | cfa04 | 61 | 5228 | 68.8 | ACTTAAGTGACTGGGCCACC | CCCTCAGCTCTGCTGTCTTT | 110 | NA | NA | Y13199 | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| EST16F4 | EST | cfa04 | 62 | 5296 | 69.7 | ACACATTCATAAGTCTGTTGGCATA | CTTTAAGGTTGGTTGATAAGTGGAA | 192 | NA | NA | AJ536937 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_385-C17 | BAC | cfa04 | 63 | 5351 | 70.4 | CTGGTGGTCTGAATCTTCTTTC | GCAAATCTTGACCCTAACTGAG | 427 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_376-M3 | BAC,Microsatellite | cfa04 | 64 | 5431 | 71.5 | AAAATGGTGAAGAATGATGGTC | CTAGCATTATGGATTTGCAACC | 308 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FST | Gene | cfa04 | 65 | 5510 | 72.5 | GTCTGTGCCAGTGACAATGC | AAGATCCAGAGTGCTTTACTTCCA | NA | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN207K23 | Microsatellite | cfa04 | 66 | 5578 | 73.4 | GATGCCCTGTATGCCTGAGT | TCCCATGATGCAGAAATTGA | 253 | NA | 0 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| EST18H7 | EST | cfa04 | 67 | 5601 | 73.7 | GCATTCCTTAAATACTCTGAATGCT | TCAAAGAAGATCCAAAAACAATACC | 174 | NA | NA | AJ536938 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH4030 | Microsatellite | cfa04 | 68 | 5624 | 74 | TACCTGTGCCAAAGAAGGTATC | TTCTTTCAGGCTATTGTGGTTC | 476 | 0.81 | 0.8 | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH3948 | Microsatellite | cfa04 | 69 | 5663 | 74.5 | ATTCTGACACTTTCCCAATCTG | TACCCTTCCCTTTACCTTTCTC | 227 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN79O09 | Microsatellite | cfa04 | 70 | 5685 | 74.8 | TGTTACACTCTTGGGTTGGT | GGGGGTGGCTAGAAATACA | 155 | NA | 0.78 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_373-G11 | BAC | cfa04 | 71 | 5708 | 75.1 | AAGGAGTGGGTGATTCATACTGTT | GCTTAAAGATGATTTAATGTCGGC | 209 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST16C1 | EST | cfa04 | 71 | 5708 | 75.1 | GATTTTGGAGTGAAGCAGATGTTAC | TAGGACATCGTCATTAAAACCTTTC | 223 | NA | NA | AJ536936 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN167B18 | Microsatellite | cfa04 | 72 | 5748 | 75.6 | CAGCCCTCTAACCCATTTCA | GATGCAAATTGATGTCTGCG | 257 | NA | 0.32 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| REN160J02 | Microsatellite | cfa04 | 73 | 5771 | 75.9 | ACCGTGCACAAGTCAGTCAG | AAGCTGAGCCATTCTTTTCC | 248 | NA | 0.82 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_372-O13 | BAC | cfa04 | 74 | 5794 | 76.2 | CTGGAAATCAAAGCAGGTAAAG | CTAGTTCTAATGGTGAGCAGGG | 226 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST4G5 | EST | cfa04 | 74 | 5794 | 76.2 | CATTCAAGTGCACCTAATACAGTAA | ATCATTTGCTTTGTATGTTTCATCA | 152 | NA | NA | AJ536951 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| PEZ17 | Microsatellite | cfa04 | 75 | 5817 | 76.5 | CTAAGGGACTGAACTTCTCC | GTGGAACCTGCTTAAGATTC | 199-227 | NA | NA | NA | Halverson J. in Neff et al., 1999 (Genetics 151, 803-820) |
| BAC_381-P14 | BAC | cfa04 | 75 | 5817 | 76.5 | TGTACACTACCAACGAATTTTCTG | GATGACTCCTGCTTTCTTGTTC | 364 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN144A06 | Microsatellite | cfa04 | 76 | 5857 | 77.1 | CCATTGCAAATGGCAAGATT | GAAATTGGCCACAGTTCCAT | 158 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| PTGER4 | Gene | cfa04 | 77 | 5896 | 77.6 | ATATTTTCTACTTTCCTCCCCACT | ACTCCTATGGCATCTGTGATACTT | NA | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| GHR | Gene | cfa04 | 78 | 5935 | 78.1 | AGATCTCCTCAAGGAAGGAAAATTA | AAGGATGTTAAGTGATTTCTCATGG | 199 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| FH2097 | Microsatellite | cfa04 | 79 | 6032 | 79.4 | CAATGTCGAATTCCATGGTG | ATGGAGCAAGATGTGTTTGTG | 288 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| STS303M22 | SNP,STS | cfa04 | 80 | 6178 | 81.3 | TCTTCTCTCTCATGCTTCTTCTCTC | AGGGAGAGAGAGAGCTTTTATGTGT | 412 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST25A6-B | EST | cfa04 | 81 | 6528 | 85.9 | CTGCTCTTGTAGAAATAGGACCTC | ATGTTTGGTGACTGGTAGTTAGG | 112 | NA | NA | AJ536943 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN126G20 | Microsatellite | cfa04 | 82 | 6682 | 87.9 | TAGGGTATGCACTTGTTTTG | CCAGGGGGTATCCATCT | 180 | NA | 0 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| REN89J09 | Microsatellite | cfa04 | 83 | 6764 | 89 | AGAGTTTAAAAAGCACAGTAG | ACACATTTCCCTCCCATCT | 214 | NA | 0.34 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| EST25H12 | EST | cfa04 | 83 | 6764 | 89 | GACAAAACAAAAGATTTTTATTGAAAG | AGATCATTACGTGCTTTTGGATTTA | 122 | NA | NA | AJ536944 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST27E12 | EST | cfa04 | 84 | 6787 | 89.3 | TCTCTTCCTACCTCTTTGATTACTCC | CAATGGATAACTGGAATGTTTTTGT | 116 | NA | NA | AJ536947 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| AHT103 | Microsatellite | cfa04 | 85 | 6827 | 89.8 | GGAAACTCAGTTATTTTACA | GCCCTAGAACTTCACACACA | 76-84 | NA | NA | NA | Holmes et al., 1995 (Animal Genetics 26, 132-133) |
| BAC_373-E10 | BAC | cfa04 | 86 | 6850 | 90.1 | AATAACCATAGGGCAGAACCAATA | TAGTTTACCTTTTAACCACCAGGG | 198 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| BAC_376-F3 | BAC | cfa04 | 86 | 6850 | 90.1 | ATCCCCTGGTAGTTACTGAGAACAT | GGCAAATTACTGTCCATTTAACATC | 198 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN204J06 | Microsatellite | cfa04 | 86 | 6850 | 90.1 | TAAACTCATGGTCCTGCGTG | GTTCAAAGGGGAGAAGGAGG | 339 | NA | 0 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| EST23E6 | EST | cfa04 | 86 | 6850 | 90.1 | CCCTTCTTCAAGGTACATGTCATAA | ACATAATGGGTGAAGCTATGGAAAG | 101 | NA | NA | AJ536942 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST20D9-B | EST | cfa04 | 87 | 6873 | 90.4 | ATTGAACGGAAGTACAGACAAGAGT | TTATTTCAACGAGCACACTTCATT | 210 | NA | NA | AJ536939 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| EST28F4 | EST | cfa04 | 87 | 6873 | 90.4 | GTACTTTGGAAATTTCTGATGATCG | GGAAAAGTAATGTACAATCCATCCA | 196 | NA | NA | AJ536949 | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH2472 | Microsatellite | cfa04 | 88 | 6896 | 90.7 | ATTGTCTGTTAACCAAACCTGC | AGTCCTTCGAGTGAGTGAGGT | 312 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| FH3354 | Microsatellite | cfa04 | 88 | 6896 | 90.7 | CTTAGTAGACATGTGGTAGGGG | TGGTATTTTGATAGGGATTGC | 261 | 0.69 | 0.66 | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN230K22 | Microsatellite | cfa04 | 88 | 6896 | 90.7 | GAGTCCCTTCGTGCATTCAT | TTCTCCAGAGGGAAAATAGTTGA | 197 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| REN211H18 | Microsatellite | cfa04 | 89 | 6936 | 91.3 | TTCAGGAGGTGGATGATGGT | AAAAACCTATGAATTGCCATCTG | 269 | NA | 0.66 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| AHTH142REN | STS | cfa04 | 90 | 7028 | 92.5 | CATTGGGGTAAAAGCTGCAT | TTTGATGGGGACAGAGCTTC | 163 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| BAC_381-P3 | BAC | cfa04 | 91 | 7068 | 93 | AGTAATGTAAACAGGCAGCTACG | CTCCAGGTTATAAGAGGGCTTC | 300 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| FH2457 | Microsatellite | cfa04 | 92 | 7123 | 93.7 | AACCTGGTACTTTGAATTTGCA | TTTGGTCAACATACCTCTCTGG | 360 | 0.91 | 0.91 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| REN262N08 | Microsatellite | cfa04 | 93 | 7146 | 94 | AGGATTTTGTGGTGATTGGG | TTGCAGCCTATTGTGGACTTT | 136 | NA | 0.72 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| FH3233 | Microsatellite | cfa04 | 94 | 7200 | 94.7 | ATGTTGGCAAATTGAACTCC | AAATAACAGAATGGTACAGACAGG | 257 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| STS164F03 | SNP,STS | cfa04 | 94 | 7200 | 94.7 | AATCGAATTAAGGGTTAGCACTTTT | GCTCTCTCTCTTTCTCTTCCTCTCT | 358 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN215C13 | Microsatellite | cfa04 | 95 | 7240 | 95.3 | AACCATGGCCATTTCTGAAG | AAAGACTGCTTATCACAGCCC | 293 | NA | 0.54 | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| FH2705 | Microsatellite | cfa04 | 96 | 7330 | 96.4 | TGCCTGTGTCTCTTCCTCTC | AAACCATCAGCTTCTTTTGAC | 205 | NA | NA | NA | Guyon et. al., 2003 (PNAS 100{9}, 5296-5301) |
| REN59H07 | Microsatellite | cfa04 | 97 | 7419 | 97.6 | AGGCACTTATCGCTCTCAT | TTGTTTTTCCATCATTTTT | 179 | NA | 0.66 | NA | Mellersh et al., 2000 (Mammalian Genome 11, 120-130) |
| PEZ13 | Microsatellite | cfa04 | 98 | 7496 | 98.6 | AGTCTGGTGATTTAATTCGG | GTCTAGTCCCCAGTCTAGTTCACTGCCC | 170-234 | NA | NA | NA | Halverson J. in Neff et al., 1999 (Genetics 151, 803-820) |
| EST-CFZ97750 | EST | cfa04 | 99 | 7549 | 99.3 | CACAACACATCCCCACAGAG | AGATGTCAGCTAGAGGGCCA | 297 | NA | NA | NA | Breen et al., 2001 (Genome Res. 11, 1784-1795) |
| G07704 | Microsatellite | cfa04 | 100 | 7587 | 99.8 | AGCCTGCCTCTCCCTCTCCA | AGAGTCACAATGCAACCCCACAA | 246 | NA | NA | NA | Yuzbasiyan-Gurkan et al., web site |