Map of CFA21

Marker Name Marker Type Repeat/Gene Name Forward Primer Reverse Primer BP-Size Run T PIC
REN144A16 MSAT (CA)9 CGGTTTCGTTCTTTTTATGGTT AGGTGTTGGCAAGGATATGG 340 60 0.34
BDNF GENE Brain-derived neurotrophic factor CCTTTCGACACAGGGACTTT GACAGCATTAGCGAGTGGGT 103 60 -
D-INRA21 MSAT (TG)16 ATGTAGTTGAGATTTCTCCTACGG TAATGGCTGATTTATTTGGTGG 79 ND -
REN187M02 MSAT (CA)15 CTTGGCCCTTCCTACACAAA TGTTCTTATTCTGAGCCCGC 193 60 0.58
REN313E19 MSAT (CA)10 CAATGCTGAAACCATTGTGC TGATTCTCCTGTCCAATGTCTG 223 60 0.32
FH2233 MSAT (GAAA)~40 CCAATGCCAAATTCCTGACT ACCATTTCCTTTCCCAAAGT 292 58 -
CALCA GENE Calcitonin CGGGGCTGAAACACCTGG AATGCCAGCTGGAAGAGCAATC 187 60 -
PTH GENE Parathyroid hormone CACTGCTGTAGACAGCATAGGG CATGGCTAACAATGGATTACATGTA 106 55 -
REN118B15 MSAT (CA)17 TAAACTGGCGTAACCTCTC TCCCAACAGCCAGTCCGTATC 218 52 0.72
REN109A16 MSAT (CA)13 CACATCCGGGACTCACACC CCCCATTCATTTGCTTTTA 219 53.8 0.32
REN107L03 MSAT (CA)13 CACATCCGGGACTCACACC CCCCATTCATTTGCTTTTA 218 52.9 0.32
REN309L01 MSAT (CA)16 GGGAAATGCTGTGTCATGTG TGAACCACTGGGGTAAGTCC 190 60 0.69
D29070 GENE HUMNK075(HuEST) GGTTCCCCAGACTCCAAACA TGCAGAAGTGCTCGGGC 141 48 -
SAALK GENE Potential-serum amyloid A like protein AGGCCGGAGTGGCAAAGAC TGGCCAGAGATCTCAACGAGTG 143 60 -
REN285A14 MSAT (CA)15 GGCTCCTGTACACCCCACTA CAAGACCGACCACCCTAGAA 309 60 0.72
FH2972 MSAT (GAAA)30 TTGGTGGTGATCATTTCACA GCCAGGTTTCCTGAAAGATA 251 58 -
CLN2 GENE lysosomal pepstatin insensitive protease ggTgggATCCTATCCCTgAT TCAggACCCCATCAgAACTC - 60 -
FH2441 MSAT TETRA REPEAT TAGTTGTGTGCATGATCTCG TGGAGAAAGTTCCATGTGCA 129 58 -
CCKBR GENE cholecystokinin B receptor gtgctggagctgaacaaaca ttccagctagcacggagttt 170 60 -
HBB GENE Beta globin CAATGCTAAAGTGAAGGCCC CTGAGCTTAGCAAAGGTGCC 100 60 -
G02620 MSAT (CT(9C(CT)4 CTGCATGGAGCCTGCTTCTCT GAATTGTAAGTTTTCAACTGCC 144 - 0.375
REN264O17 MSAT (CA)13 ATTGAGCAAAGGCTCGAAAA GCAGGGTCTGAGCTTGTAGG 209 60 0.63
UCP2 GENE uncoupling protein 2 tacgactctgtcaagcaattctaca atggtcttgtaggcatcaacagt 200 60 -
UCP3 GENE uncoupling protein 3 gttttgctgatctcctcaccttt gaactgcttgacagagtcatagagg 242 60 -
SPC25 GENE Signal peptidase complex GATGCATACGAGCCTGAAATATC TCTGTTTCCTTCTCTCTCACCC 133 55 -
AHTH298 MSAT/CSM (GT)12 CCAGGCATTCGAGGGTG TCCCAGAACTTGAGGAACCATAG 103 - -
REN62H01 MSAT (CT)7(CA)16 CCTATGTCTCTGCCTCTC CCCAGCTCTTTTCCTCCC 116 46.3 ND
REN37A15 MSAT (CA)13 AGCAAGGTCCACAAGAGCC GTAGTTCCAGTCACATCCT 182 49.2 0.63
REN263B23 MSAT (CA)14 CCATCATAAGTCAGGCACCA TATAAAATGCCTCCCCCTCC 270 60 0.32
DTRCN10 MSAT (GGAA)18(GAAA)3 CATTCCTgCTTTAAggTgAg ggATCATTTCACTCCTTTgT 246 - 0.72
REN256J10 MSAT (CA)10 TCCTAATTACCCCTGACCCC GTGTGGAAGTTCCCTCCTGA 330 60 0
REN108B17 MSAT (CA)10 AGAGCATGATGCTGGAAC TCTGATATGTTCAAGCTATGAATT 230 50 0.32
REN160C04 MSAT (CA)18 GAGACCATCAAACTGGCTCC CCTCCAAAGCCCTATATCCA 113 60 0.54
REN252J02 MSAT (CA)13 AGGCGGCACTAAACTGCTAA CACCCAGAAAGCTCAGAAGG 299 60 0.54
REN68M20 MSAT (CA)21 GCTTCAAATTATCCCACTGAG CCCAGCTTTCTATATCAATGG 230 52.3 0.72
REN59K01 MSAT (CA)13 CCCAAGTGTCCATCTCCAT TTTTCTAATTCCAACCAT 146 46.5 0.54
REN199o08 MSAT (CA)18 TTGCTAGACCCCTCACATCC GTGGTGTTCTCCATCTGCAC 243 60 0.76
REN245F15 MSAT (CA)9 AAGCAAAGGAAGCCATTCAA CGACCATCTGAATTCTTTTCTG 210 60 ND
REN108G11 MSAT (CA)9 TGGGATTCAGAAACCTCAT AGCAGCCTTCTTCCAATAC 165 49.3 0.34
TYR GENE tyrosinase precursor gtagccgattggaggagtacaata cttccagtgtattcctaaagctgaa 210 60 -
REN242O23 MSAT (CA)16 CATGACCTGAGCTGAAACCA CGTCAACTGGTTCAGGGAAT 255 60 0
REN260L24 MSAT (CA)16 CTTCCCACTGTGCCAAAAAC TATGTCGAGCTCATGCCTTG 355 60 0.69
FH2617 MSAT TETRA REPEAT TTCTGGTTCCCTCTATGCTCT ATCTAAATTCCCCTGCTTGC 236 58 -
DGN17 MSAT (GAAA)53 CTCAGGGTTGTGAATTCAAGCC ATAGATATCTTATGTATGCCCTGGC 350 - -
FH2473 MSAT TETRA REPEAT GTAAAGCTGGGTGACTGAAAGG CCTCCTATGCCCTTCTTTCC 398 58 -
PGR GENE Progesterone receptor ATGAAAGCCAAGCCCTAAGC GGCAGTGACTTAGACCACTTGAC 220 55 -
FH2312 MSAT (GAAA)~51 AAAATAATACTCATCTATATGCTGCC ACAACATAAGAATGTGTGTCATCA 318 ND -
FH2161 MSAT (GAAA)~21 TCAGCAAGAAACCCTCCAGT CATTCCCAACGGAGGACTCT 250 58 -
C21.889 MSAT (CA)N TGTATGCACACAGATAAAGT CACACTTCCCTATACTTACACATA 107 58 -