Map of CFA18

Marker Name Marker Type Repeat/Gene Name Forward Primer Reverse Primer BP-Size Run T PIC
SEC61G GENE Sec-61 complex gamma GAGTCTTTCATCTTGGGGATTG GGAAGACAAAAAAAAACATCAAAGA 107 55 -
REN129P11 MSAT (CA)11 ACTTTATTTCCCTCCTACT AGAAATGCTGATGAATACT 304 51.2 0.18
REN162O13 MSAT (CA)11 GCTCAACACGGGCTTTTTAC CCATTGTGTGTGTGCAGCTA 159 60 0.18
REN42L13 MSAT (CA)11 ATGCCTGTGGTAGATG CTGGAAAGCTGAAAAGTAG 165 47.4 0.58
REN186N13 MSAT (CA)18 imp AGGCTCTCCGAGGGTAAGAC ATTGCTTGGATAAGAGGGGG 369 60 0.66
REN106H23 MSAT (CA)13 TCCACACTTGGTAAATACTTACTG TGAACAAACAATTCTTTACCTTT 160 50 0.18
DLD GENE Dihydrolipoamide, NAD+ oxidoreductase CTGGAAAATTTTCTTCAACCCTTAT TCACCTGGCTTCAAACACAG 165 55 -
REN249N22 MSAT (CA)14 GATGCTCCCTCTGCCTATGT GACACGCACACTCGTCATATTT 301 60 ND
REN54P11 MSAT (CA)18 GGGGGAATTAACAAAGCCTGAG TGCAAATTCTGAGCCCCACTG 231 55.2 0.71
REN52K18 MSAT (CA) 18 TGGTATCTGCCTCTTTGTTTA TCAGCTCCCTCCAATCCCA 361 50.9 ND
REN183B03 MSAT (CA)19 TCATTCTGACAGGCATGAGG GGTTTCCAAAGAAGACCTGG 149 60 0.64
C18.156 MSAT (AC)15 ACAACCAACACACACAAAAACC TGTTATCCCAGTGGCATTAGG 136 58 -
COS18 MSAT/CSM (TC)19 CGTGGTGCCGGCCCTTTGAT TTTAGCGCCTGCCTTTGGAC 360 60 -
CAT GENE catalase taccaagatttggcctcacc catctgttcaacctcagcga 103 60 -
CD44 GENE Cell differentiation antigen 44 variant TGGAAGAGAAGGTGGACATCTTCC GGTCACCGGGATGAGGGTC 106 60 -
WT1 GENE Wilms tumor 1 GGTGCCTGGAAACGTCCG ACCGGGAGAACTTTCGCTGAC 155 60 -
TPCR63 GENE Putative olfactory receptor AGGATACGTTCCTCAGAGGGCC ATCTAATGAGTGGTTGGTCCCTGGT 129 60 -
HLA79 GENE MHC class Ib TCTATTCTGGCATTGGGGAC TGAGTAGCTCCCTCCTTTTCTG 266 55 -
REN47J11 MSAT (CA)11 TCTCCTCGCGTGTTTCTG GGGGACACTCAGAAGGACG 163 53.1 0.69
REN248C19 MSAT (CA)10 TGACTGTGGCAAGCAAGAAC GGCAAAGAAAGATGGACTGG 319 60 0.64
REN167O08 MSAT (GA)8(CA)12 TGTGAGATTGAGTGAGAATCTCTG CTCAGGTGGCTTCCTCACAT 172 60 0.62
OLF2 GENE Olfactory receptor gene 2 AGAGTGTGCTCCCTGCTGAT TGCAACAGCAGTTAAGTGGG 357 60 -
OLF1 GENE Olfactory receptor gene 1 GTCTCGGGGCATCTGTGTAT GATGGCCACAGAAGTCAGGT 357 60 -
FH3010 MSAT (GAAA)38 CTTTTACCTACGTGCTGTGG CAGCTCTTGGTAGGTGTGC 365 58 -
REN281E03 MSAT (CA)9 imparfait TGGGTCCTTCTGTCTCTGCT TGCATGTAGGAGGTTGCTCTC 303 60 0
REN258K13 MSAT (CA)14 ACCTAGTTTGTCCATCCCCC CGAGACGTGGAAACAACTGA 335 60 0.48
REN50L03 MSAT (CA)17 TTCTTGGGTGTGATAATAGTG TGCACCTTTCACCTACATT 265 50.9 0.64
REN95P11 MSAT (CA)10 CCCCCGGGCTCAACTCC GCTCACACGCCCACTTTCATA 195 57.3 0.32
REN168H09 MSAT (CA)15 TGAATTCACTGGGGTTTGGT TGCATGCAAGAACATCCG 112 60 0
REN266I17 MSAT (CA)17 CCGGTTGTATGAGCCTTTGT TCACACAGACCAATCCCAGA 132 60 0.56
FH2429 MSAT TETRA REPEAT GATCCACTTTGAATTGATTTTTG TTCAGCAAATGGTTCTGGAA 173 ND -
C18.460 MSAT (TG)17 CTTCCCATTATAGCCCTGTCC GGTGTCAGGAAAATGAGACCA 147 ND -
REN64K04 MSAT (CA)17 TCAGGCCAGGAGAAGAAGT TCGGAAATTGTGGAGTCAG 165 53.5 0.66
EST-CFZ97737 GENE - CCGATCCATCTCCACAGTCT CTGTCTCTCAACGTGTCCGA 203 - -
ROM1 GENE/CSM Rom 1 CTCTTTGATCCTCGTCAGCC TGAGGGTCAGTAGGTCCCTG 230 60 -
AHTK292Ren CSM - TTTGTACTCCTAGGACAAGGATTTG TCCTCCTGTGACAATTCAGG 250 - -
REN108A21 MSAT (CA)17 TTCTGGAGGAGAGAGAGAGTGG TGGGGTTTAAAGTCATTGCC 242 55 0.32
REN195J11 MSAT (TA)7(CA)16 imp CCCCGAAGCAAAATTAAACA CTGGGGTTTAACAGCTTTGC 207 60 0
AHT130 MSAT (GT)19 CCTCTCCTGGTAAGTGCTGC TGGAACACTGGTCCCCAG 107-119 55 -
AHTK32 CSM - TACCAAGACCCAACAGCAAG GAGCCTGCTTCTCCTTAT 159 ND -