Map of CFA15

Marker Name Marker Type Repeat/Gene Name Forward Primer Reverse Primer BP-Size Run T PIC
AHTH257 MSAT/CSM (TG)8C(GT)10 CCCACACCTTTGCTGGAC TGGGAGATCCAAGAGGAGG 126 - -
REN06C11 MSAT (GT)19 TGCAGGGCAGAGGCTGGAGG GGGGGTGTCGGTGGAGTTCT 89 56 0.79
REN307J23 MSAT (CA)14 TTCCAAAAATGTATGTGTGCATC CACTTTGTGTCAGACTTCTGGTT 357 60 0.76
REN247M23 MSAT (CA)19 TGGTAACACCAAGGCTTTCC TGTCTTTTCCATGGTGGTGA 270 60 0.56
REN122C19 MSAT (CA)9GA(CA)5 ATGGCTATGGCTGTTTA TTCTCTGTGTCTTTCTGTCTC 196 48.7 0.32
FH2535 MSAT TETRA REPEAT GTCATTGACAGACTACAAATCTCC ACAGACTTGCAGTATTTTGTCTG 145 58 -
REN265J03 MSAT (CA)13 ATTTGCTTAAGAAGCGGCAG AGTTTCATGCTGTTCCCCAG 179 60 0.70
FH2171 MSAT (GAAA)~73 CTATGCCACTCTAGATTCTGGG ACACATGCAGATAGGTCCTGG ~644 58 -
REN143N23 MSAT (CA)11 CAGACGGACGACTGCTGATA GAGCGTGTGTACATGTGCGT 190 60 0.66
RVC1 MSAT (AC)20 TCACTGCATATAGAATTAGG CCAATAGGCTGTGAGTGAAA 158 ND -
IGF1 GENE/CSM Insulin-like growth factor 1 AGCCCACAGGGTACGGCTC CTTCTGAGCCTTGGGCATGTC 179 60 -
FH2295 MSAT (GAAA)~20 TCTCGGGGATAGTGTTATAACTCC GTCAGGAAAAGGACATTTGACC 390 ND -
FH2017 MSAT (GGTA)6(GATA)12 AGCCTCTATAATCACGTGAGCC CCCAGTACCACCTTCAGGAA 149 58 -
REN159B09 MSAT (CA)10 GCGTCCCAGGAATCATTGT AGAGGCCTACCACGTTAGCA 152 60 0.66
REN134K05 MSAT (CA)9 CTCCCAGTGGACATTTGAC TGTTGTAGAGGCTGTCCTG 173 51.3 ND
REN303E22 MSAT (CA)18 GGTTGTTGCACGCTAAATCA CCAGGTCATGGAGAGGGTAA 366 60 0.72
CPH4 MSAT/CSM (GA)2TA(GA)17 ACTGGAGATGAAAACTGAAGATTATA TTACAGGGGAAAGCCTCATT 118_150 59 0.63
UOR0442 MSAT TRI REPEAT TCAGCTGGTTAATGATAGGTGG ATATTCCTTTGCTCTGAGACGC 224-240 ND -
AHTH17Ren CSM - TAGAGTAAGGGGCTGAAACATCACA ATGGAACCAGAGAACACTTTGGAA 237 - -
TRA1 CSM Glucose regulated protein ppk-98 TTTGTTGAGCGACTTCTGAAAA GCAGAGGCTCAAATTCTTTCTC 196 55 -
REN230G12 MSAT (CA)9 AGTGGCTTTCCCTCCTCATT CATTGCAGTGCATACTTGCC 376 60 0.50
REN193M22 MSAT (CA)12 CCATTGGCCATGTATCCTTC GAGGATGTCATCACTGGCTCT 205 60 0.62
REN66E15 MSAT (CA)19 ATATGGGTACAATTCCTCTGG CCTGCTGGGGTAAGTATGTA 132 50.4 0.48
REN01N09 MSAT (GT)7(GT)9 CTTCCAACTCTACCACCAC GCCATCATTAACCTCATTT 147 49 0.49
REN123N11 MSAT (CA)15 CTGGCACATAGGAAGTC TGAGAGTAGGATAAAAATAAT 241 45.6 0.68
FH2088 MSAT (TTTA)10(TTCA)4 CCCTCTGCCTACATCTCTGC TAGGGCATGCATATAACCAGC 117 58 -
FGG GENE Fibrinogen, gamma polypeptide GAAGCAAAGTGTCAGGAACCTT ATTTCCAGACCCATCAATTTCA INT 55 -
FGA GENE Fibrinogen A alpha TCCTGGGGACTACAAGAGCCAG GTGGAGCTCCCAGGGTTCCT 180 60 -
C03509 MSAT (CA)15 CATTCTGCTCATCTCCATAAG GGCACAACTAACTCATTTCTAT 188 58 -
REN144M10 MSAT (CA)15 TCTCATGCAAATCTTCGTTCA GCCACCTCATTCCAAAAAGA 211 60 0.66
FH2278 MSAT (GAAA)~39 TCCACTCTGAGCATGGAGC GCCCAGTTTTCCCAGTAACA 322 58 -
REN204N22 MSAT (CA)16 AGGAAAAACACATTTGGATGG TCTTGCTGTTTGCTGCAGTT 277 60 0.62
AHT139 MSAT (AC)13 TCTGGTGTGTTTGAGTGAGC ATGCAGCTCCTGGCACAG 150-158 59 -
FH2360 MSAT (GAAA)~30 CATTGATGCTGAATTTGACTTC TTACACACACTATTTTGCTGGTCA 315 58 -
NPY5 GENE neuropeptide Y receptor type 5 CAGTAAGTTCATACCGGGGG TCAGCTTTGATCCCATTATTGA 347 60 -