Map of CFA13

Marker Name Marker Type Repeat/Gene Name Forward Primer Reverse Primer BP-Size Run T PIC
C13.391 MSAT (TG)13 ATTTGAAGTCCGTGGCTCC GAAACAAAGAGGCAGCGATC 148 ND -
REN120P21 MSAT (CA)16 GGTTATTGTAAAGTCTGAGTGTTG AATAGACTATGTAACTGTCTCTGGC 172 50 0.50
REN98K18 MSAT (CA)12 GCAGCGGTAGTGGAAATAG TGGTGCAAATGTGAAGAT 183 50.1 0.48
REN238L19 MSAT (CA)15 TCTTCAAAAACAATGAGAAAAAGA GGGGCAAGAACTGAAACTGA 196 60 0.50
REN234A03 MSAT (CA)16 TGCATGGAGTTCCCTTTTCT GCATGGAGCCTGCTTCTAAC 227 60 0.48
REN307K04 MSAT (CA)14 CCAAAGTTTGCACAAGGGAT CACAGCTACCTTTGCTTTTCA 316 60 0.70
REN165L17 MSAT (CA)12 ATTTCTTGGGTGCTGGATGA ATCTGGCAATTGAAAGGTGC 132 60 0.68
REN147D07 MSAT (CA)23 CTGGTGACCACAGAATGGTG CATGACTCGCTTGTCTTGGA 324 60 ND
REN286P03 MSAT (CA)21 GCACATTCACAAAGTGGTGC GCAATGGAAAGAGGATGGAA 331 60 0.78
REN39A11 MSAT (CA)8 TTGAGTTGCTGCTGGATG CACAAAACTGACCCTATT 195 47.8 0.56
ANXIIIB GENE Annexin XIIIb AGCAGCCTCAAAACGCTTGG ATTCAGTCTCTACCCACTCTGTGCG 197 60 -
REN13N11 MSAT (CA)17 TAAGTGGCCAAATAATACAG GCTCAGGAGCATATGTGGGT 310 49 0.54
DTRCN6 MSAT (GGAA)19(GAAA)6 CTTgATggCACCACTCTAAT gTCCCTCAAAACACAAACAT 358 - 0.65
REN134O22 MSAT (CA)18 CCTTCTCAGGAACTCAGTGTT AAGTCTCAGGGGGAAGGAG 192 54.1 ND
REN65A19 MSAT (CA)10 GTTTGGATGTATTAGATGTC AGTATTGGCAGTATTATGAA 247 47.4 0.17
SRP72 GENE Signal recognition particle CTTGGCCTACTTTACCATCCAG TTCAGACTCTAGTTGAAACCGAAGT 200 55 -
AHT121 MSAT (CA)28 TATTGCGAATGTCACTGCTT ATAGATACACTCTCTCTCCG 101-129 59 -
REN154P17 MSAT (CA)9 ATTGCTGTTTCCCAGAATGC ATCCTTGCCATCATCTCAGG 349 60 0.58
REN107M21 MSAT (CA)14 TTCACCTGCCATATTTCTCCT CCTCTGGGTGGCTCTGTG 222 52.7 0.83
C07102 MSAT (GT)17 AGTCACAGAGGGCAGTGTGG ACATCCCGCTTTAATTTGTTTC 118 58 -
CNCG1 GENE Rod cGMP gates channel alpha subunit CTGAGGGTGTGAGGGGAATA TTGTCAGGGAAGATGGGAAG 199 60 -
C13.365 MSAT (CT)4(AT)4A(TG)16 TGGGGATGAAAATGCCTCTA TATGGATTCCTGATTGGAATCA 174 ND -
REN126A23 MSAT (CA)12 TGCATTCCAGGGCTTCTAC GCACTGCTATTCCGATGTTT 129 51.6 0.66
REN166I13 MSAT (CA)19 TTTGAATGGCTGTGACATGG CCATCCCACAATGGAAAAAG 229 60 0.83
REN66K24 MSAT (CA)11 TTGTTCACCATTGCTATTTTT CAGATGTGCCTTATGTGC 225 48.1 0.60
REN227M12 MSAT (CA)12 CCTGAGAGGAAAAAGCAGCA TGCAACTTTCTTTGGACAATTA 135 60 0.74
REN65L04 MSAT (CA)13 TTGCTGATGGGTTTGTTA CAGTTTTTGATTTATGAA 201 46.1 0.70
AHTH239 CSM - TGTTTCATTGGTCTGCGTGT TAGGAGGCCGATTCTCTTGA 263 - -
FH2348 MSAT (GAAA)~19 GCATGCAAAGGTGTTAATTGG ACACAAGGAAGCTTTGGGG 430 58 -
C13.758 MSAT (CA)18.5 AAGCATCCAGAATCCCTGG GTTGATTGGGAGATAATCCACA ~476 ND -
C13.900 MSAT DINUCLEOTIDE TTGGACTTCTAATTTTTCATT CAACTGACTAAATCTCCTAATG 121-132 55 -
GnRHR GENE Gonadotropin releasing hormone receptor GCTTCTTTCTTGTTGAAACTTCAGA AGCGGTCCAGGCTAATCAC 259 55 -
IL8 GENE Interleukin 8 GCCAATGAGACTTCAAAAAAATCTA GTGTGCCTAGACATTGAATAGGG 174 55 -