Map of CFA08

Marker Name Marker Type Repeat/Gene Name Forward Primer Reverse Primer BP-Size Run T PIC
MMP-14 GENE matrix metalloproteinase 14 tgcccaatggaaagacctac ttccttcccagaccttgatg - 60 -
MYH7 GENE Myosin heavy chain, cardiac muscle beta GGTGCTCTACAACCTCAAGGAG GATGGAGAAGATGTGGGGC INT 55 -
AHTH240Ren CSM - CCCCACTTCCTCTGGTCAGT GCTCCAATCACCACCATTCT 141 - -
CMA1 GENE chymase AGGAGCCCCTAACCAAGTGT tgagaactaaaggccagcgt 128 60 -
REN248C05 MSAT (CA)9 CAAAGAGAAAAGCTTCCTCCA GCTGCTCACTATCACCACCA 284 60 0
E04007 MSAT (GA)5A(AG)15 GCTCATTGTGATTCCTTAAAACAG CTGGGGTCCGGGATGGAGT 202 - 0
REN204K13 MSAT (CA)18 TCGGGATGTTTCTCTTCCAC CTGCTTAAATTCTCCCAGCG 249 60 0.48
CPH12 MSAT (GT)16 GGCATTACTTGGAGGGAGGAA GATGATTCCTATGCTTCTTTGAG 202 58 0.39
SRP54 GENE Signal recognition particle 54k TGCTGCTGGCAATATGAAAG GGAAGTAGGAAGGAAAGAAGATGAG 201 55 -
NFKBiA GENE Eci-6/ikba GTGTGGGGCTGATGTCAAC GAACTCTGACTCCGTGTCATAGC 172 55 -
REN67O13 MSAT (CA)15 TATAATGAAAACAAAAAGACC ATAATTAAAAACTGGGAAACA 147 46.9 0.58
PEZ11 MSAT TETRA REPEAT ATTCTCTGCCTCTCCCTTTG TGTGGATAATCTCTTCTGTC 121-173 55 -
RPS11 GENE Ribosomal protein S11 ACATCCgAAAgTACAACCgC CACgTTgAAACgCACAgTCT 149 - -
LEI034 MSAT (CA)10 AAGCCCTTCATTCAGTTCC TCATGATATTCCTTTCTGACC 192 - -
UOR4101 MSAT TRI REPEAT CCTACCATGGCAAGTGCC TTCACGGTTGTGAGATGGAG 156-168 58 -
LGALS3 GENE Beta galactosides binding lectin GAAAAATCTCCCGGAAATCAG AGTCGAAACATGAAGTTTACATGTG 156 55 -
C08.410 MSAT (CA)19 GAGGAAAACCAAGTGATTTTGG ACCTGCAAGTGACCCTCTCT 200 55 -
REN95G20 MSAT (CA)24 GCAAGGCTCTGAAAAGGAAG TGAAGCTGGATGAACAAGAGT 246 52.8 ND
REN68M10 MSAT (CA)18 AAGAGGCCTCAAAAGAAAC AAAATAATGACCACAATAAGG 123 47.4 0.7
C08.373 MSAT (TA)3(CA)11 TATTTAAAAAATCCCAGGCACA AGCATCAATTAGATGTCAGCG 197 ND -
FH2144 MSAT (GAAA)~14 GTGGCTCTTTTTGATGAGGG CCTGGGTGGTTCAGTCAGTT 289 58 -
REN206K11 MSAT (CA)18 ACTGCTGGATTCTGAAGGCT AAATGAGCCAACTCACTGGG 176 60 0.5
REN268i01 MSAT (CA)11 GCCTCAAAGACACTGCATCA ATGATTGGATTGTGCCCCTA 195 60 0.66
REN105N22 MSAT (CA)11 AAGATTGCCCTGGACAATTG TTTGGCAGTTTTAGGCATCC 192 55 0.32
REN288F11 MSAT (CA)11 ATTAGCAGAAGGACGGGGAT GAGGGTTTTAGGGGTCAAGG 275 60 0.72
REN99G13 MSAT (CA)14 TTCCCTAAATACCTTGAGAGT GTCCATTTGCGTTTCCACAG 213 52.3 0.58
REN108A18 MSAT (CA)13 AGACACCTTCATTCATAAGTAGAAG GGCAATGTTACAAGATTAAATACTT 238 50 0.68
TSHR GENE Thyrotropin receptor precursor TGATGTTTCATGGGGCAAATTTC GTGAGAAGCTCAATGTTGACCTGGT 221 60 -
REN178J05 MSAT (CA)19 AATGAGCCATTAGCACCCAG GCATCTGAAGAAGGACCCAG 343 60 0.72
REN196F07 MSAT (CT)8(CA)14 ACAGCAAGTACGCCGGTATC CACAAGTCATTTCAAGGGGAG 204 60 0.48
EST-CFZ97778 GENE - TCAACCGCCTGGTGAGAT CGTATTTCCACGATATGCGA 124 - -
REN148E17 MSAT (CAAA)9 GCTGCAAAGACTGgAAGACC ACCCCGTTCACAAATGGTTA 220 60 0.72
C08.618 MSAT (TG)21 CAACCCAGGGTGGAAGC TAGCAAGAAAATGTGCCCA 190 ND -
REN143P19 MSAT (CA)7A(CA)5 AAAGAACCCCTCAAGCAACA ACACGAGCATGGGAAGAAAG 208 60 0
COS8 MSAT/CSM (CA)14 CAACCATGGGATCAAGAGTCACAC TGCATTCGGCCCAGGACAT 246 63 -
IGHA GENE Iga heavy chain constant region ACCCATCCAGAAGAATCCTGAGC CCTCACAAACTTTTGTGTGCCAAG 228 60 -
IGHE GENE Ige heavy chain constant region CCACTGCCACATGGCTGC CCTCCTTTGTGCCGGGTG 228 60 -