Map of CFA06

Marker Name Marker Type Repeat/Gene Name Forward Primer Reverse Primer BP-Size Run T PIC
GUSB GENE Beta glucuronidase CCCTCTGAAGCCTCTGTCT CCACCTCTAAGATTCCCTTCC 131 60 -
REN285H12 MSAT (CA)19 GCTGCTACAGTGTTTAAGGGC GTGCTCACACTGTTGGGAGA 258 60 0.42
REN146A06 MSAT (CA)9N14(CA)7N4(CA)9 CTTTGTTGGCCATTCTGGTT GATTGATGGGATGGAATTGG 323 60 0.32
FH2525 MSAT TETRA Repeat CTTCCAGCCTCTAGGGGC TGCATCAGGCTCCACTCTC 342 ND -
AHTH171 MSAT/CSM (GT)19 CTCACCAGGCATAGACACTCAG CTCATTTGTTCACGCACCC 131 - -
FH2576 MSAT TETRA Repeat CCCCAAAATCTTATCATTTGC CCTGCACTGGGAAAATTAGC 312 ND -
ZP3A GENE Zona pellucida glycoprotein 3a CAACCTCTCCTCACACCTCTGTGAT AAGCAGTACGATGCCTCTTGGC 108 60 -
HSP27 GENE Hsp27-heat-shock protein TGTCCCCTGAGGGCACTCTC AGTGATGGCTACTGAGGTGAGGATG 197 60 -
EPO GENE Erythropoietin AAAGCTGACACTGTACACAGGGGAG TGCTGAGCAGATCACCCCTG 158 60 -
CYP3A GENE Cytochrome P-450,IIIA subfamily CTATCCCAGAACACCAGAGACCTCA GTCAGTCACCCCATCCCCC 213 60 -
REN206A12 MSAT (TAC)12 CCCCTGTAGGTGGTGCTTAG TCATCTTTCACATCCCCACA 166 60 ND
REN88F13 MSAT (CA)15 TCAGCTCTCATGTCCAAAAAT GGAAATGATGCAAGAGACAAG 210 52.6 ND
FH2561 MSAT TETRA Repeat TGCTCAAGGTTGAATAAATATGC TTTATGGCCTGTGGGCTC 283 ND -
REN172A18 MSAT (CA)10 CC(CA)3 GCAGCATATAGCTGGGTAGCA TCAGCCTTAACCTTAACACATCAA 146 60 0.32
COS6 MSAT/CSM (CA)19 TCTGGAGTAGTGGGATTGAAGGAG AGGGCCACTGCTGAGATGTC 161 55 -
REN210i14 MSAT (CAT)10 CTGCTCTCTCCCCCAACTTA CAGGGCCATTGGTCTAGAAA 267 60 0.66
CLN3 GENE Ceroid lipofuscinosis,neuronal 3 CAGCTGCCTGTATCTCCGAC GGGAAGCCAGAGTGTCAAGA 111 60 -
CD19 GENE Cell differentiation antigen 19 TTCTGGCTTTGGATGGATTC TGGTTAGGGTCAGCATCACA 318 60 -
ALDOA GENE/CSM Aldolase A TGAGGCAACTGTTCTGGATCCTC AGCCAAGATCTGATCTCCATGACAG 177 60 -
SULT1A1 GENE - - - - - -
AHT109 MSAT (CA)16 ACTTTCATATTACTCTACTG AACACGTCACTTGCTGTCCA 105 50 -
FH2335 MSAT (GAAA)~27 GAGTGGATGCCCGATGAC CTGCTCTGAAACTCTCCTGTCA 420 ND -
REN149M14 MSAT (CA)25 imp AGCATTTTGAATTGGGCACT CTCCACAAGAGCTGATGGGT 360 60 0.85
REN84K01 MSAT (CA)19 GGGGGAGCCACTGAACCT CTACCTGCTCCTCTGAACCA 172 53.4 0.78
REN88M24 MSAT (CA)11 AAAGAACTTATACGACTGGA GAGCATCTTTTCATACATCT 149 48 0.56
REN54C11 MSAT (CA)14 TCTAAATCCATCCGTGTCAT TCGACTGATGAAAGGACAAA 155 49.3 0.60
REN47F06 MSAT (CA)14 ACATACAGGGGGTCAGAGTCC TGCTTTGTTGGCTTGTTGC 194 52.1 0.46
FH2164 MSAT (GAAA)~25 GATTATGACTCGAACCAAAGGC TGGAGGAAGTTCATTAAGCAGC 303 58 -
LEI.2A11 MSAT/CSM (AC)17 CATAGCGACATCACATAAGT GGGCTGATAATTCAGTGAGA 184 ND -
AHTH228Ren CSM - GCCTTATTTTTGTCTCTGCTCCAGT GGGAGGTTCACAGACTTACAGGAAT 234 - -
VCAM1 GENE/CSM Vascular cell adhesion molecule 1 AATCAAAAGTGTAGCTAATGTTTG CCTATGGCATAAATTTATTTTACA 304 50 -
G01807 MSAT (CT)2GC(CT)12TT(CT)4(GT)4 AGGATCGAGTCCCACATTGG TCAGTTAGAGCATGAATCTTGTC 205 - 0.80
REN37H09 MSAT (CA)23 ATTCCCTTGTATTGCTCA CCCCAAAAAATCCAACCA 214 48 0.67
FH2119 MSAT (GAAAA)19pentanuc.rtp. AGTTGTCAGCATTGTTTTCTCA TTCAGTCTGGTATGCAATGTCC 187 58 -
REN152F02 MSAT (CA)16 GCAGGGATTATTTGAGCAGC TCTGCTTCAGAATGAAGGGC 209 60 0.46
FH2370 MSAT (GAAA)~35 CCTGAAAAATAGCTAGATGATGG GTCTTTACCTGCCTATATAGCTGC 380 58 -