Map of CFA05

Marker Name Marker Type Repeat/Gene Name Forward Primer Reverse Primer BP-Size Run T PIC
AHTH68Ren CSM - TGCTTTCTTTGCTTATTCCTATGAT TGAGAGTCACTCCATTGCTTAGTTT 248 - -
REN283H21 MSAT (CA)21 AGAGGTGTGTTCAGGGCATC TTATCGTGTGCCATGCTTTC 163 60 0
REN92G21 MSAT (CA)21 TACTCGTTCTGTGCCATTTCT CACACCAGCTCGTCCTCATAA 188 52.2 0.66
AHTH248 MSAT/CSM (CA)19 GGCCACCCCCCAACAC TGTAGAGTAGGAGCTCAAGAATTTG 139 - -
REN111B12 MSAT (CA)13 CCAGACAGAGAAGTGAGATG GTTAGCAGTGCCCGAGAC 189 49 0.64
REN109K18 MSAT (CA)13 TACATTTTCCAGACAGAGA GTGCCCGAGACTTTACT 190 47.5 0.46
FH2140 MSAT (GAAA)~18 GGGGAAGCCATTTTTAAAGC TGACCCTCTGGCATCTAGGA 146 58 -
D29618 GENE HUMNK781(HuEST) CTATTGCTTATTTATTCAGGGTTGT AGCGAACTTGCATGGTG 234 50 -
REN51I08 MSAT (CA)16 CCCTGTATTTGAGATGTTA GGGTTTGTGGCTGTATGAC 96 47 0.66
REN42N13 MSAT (CA)17 CACCTGCTTTTCCTCTTTGTA GCCTTTTAACAGACGGACACA 170 53.5 0.74
REN78M01 MSAT (CA)10 ATGGCACTTTATTTTGT ATTTCTGGGTATTTATGC 211 47.9 0.58
THY-1 GENE/CSM Thy-1 ggAgAggAgAggAgCCCTAA CggTCgTgATgTCTTAgCTg 378 - -
REN265H13 MSAT (CA)13 GCCATCAGATAGCAATGCAC ACACACCCCATCAGACACAA 176 60 0.62
CD3E GENE/CSM Cell_differentiation_antigen_3_epsilon TCCAGGTCCTGCTACTCCCAGTAC CGGTGAGTGGCCATGATGAG 178 60 -
REN114G01 MSAT (CA)13 AGCCTGCCTCTGCCTTCCT GCCCCCGTATAGTAAACATTG 151 54.7 0.18
AHT141 MSAT (CA)9CT(CA)7 CCACAGGAAACCACAGGG ACCGAGTGCTTAGTGTGTGTGT 107-109 58 -
REN12N03 MSAT (GT-AT)28 AGTTGCCAGACAGTAATAGC AGCAAGCAGGAGCCCAGAAA 239 49 0.27
ZUBECA6 MSAT (GAAA)N(GGAA)14 GCCATAAGCCCCAAGCCAGCAG TGCCTCGTCAGCCCCTCTTTCC 302 ND 0.95
REN285I23 MSAT (CA)15 CAGCTGTCCGGGGATATAAA GGCTGTGGTTTGTCCTTGTT 244 60 0.58
REN137C07 MSAT (CA)19 AGGGCCTTGAATGATAC GCGTTTGAGAAGAATGTG 121 47.8 ND
DIO1 GENE/CSM iodothyronine_deiodinase,_type_1 ACAGGAGGGCTCCTCAAGTCCT CCCCAGCAGTATCCAGTGGG 239 60 -
CPH18 MSAT (TG)12 CAGAGATACGTCTTGACACTAGCAGA AGCAGACAGTGGGCCATGTT 218_224 62 0.24
REN162F12 MSAT (CA)9 AACCCCCTCTTTGAACTTCC TGGACATGACTGCTTCAAGG 162 60 0
REN192M20 MSAT (CA)12imp(CT)9imp ATTGCAAAGCCCCAGAATGT TTTTAAGGAGCTTCCCCCAT 185 60 0.8
MSHR GENE melanocyte-stimulating hormone receptor CTgCACTCgCCCATgTATTA CAggAAgCAgAggCTggATA 201 - ND
AHTK315 MSAT/CSM (TG)19 GCCAAAATCGCTCTCCCA TTGGAGTGGGCACCAAAA 260 - -
REN175P10 MSAT (CA)12 CCGCATTTAGACACAGCTCA CTCGGCAACGTACAGCATAA 345 60 0.64
REN213E01 MSAT (CA)20 TTTCCTGGGTAACATCTGCC TGCTAAGGGAGAGAACCAGA 166 60 ND
REN134J18 MSAT (CA)20 AGCACAGGTCTACATTAC AACCAGTTTACAGTCAGA 176 47.2 0.72
C05.414 MSAT (TG)14 GCCCCTATTTTTTTTTTTCCC TTGGGTTTCACACTCAGCAG 149 58 -
C05.771 MSAT (CA)21.5 GAGGAAGCCTATGGTAGCCA CAAGACCTGAATTCCTTGTTCC 152 55 -
REN68H12 MSAT (CA)12 ATGAACCAGTATCCAATG CAACCTCAGAAGAAACCA 139 47 0.52
C05.377 MSAT (AC)12 ACGTGTTGATGTACATTCCTGC CCACCCAGTCACACAATCAG >102 55 -
REN287B11 MSAT (CA)12 CAGATTCCAGGTTGGGAAGA AGCTGTAGGATACGCCGAGA 348 60 0.18
REN122J03 MSAT (CA)14 GTGCGAGTCATCAACAAAT ACTAAAGCCCATAAATCGTG 197 50.9 0.66
AHTH201Ren CSM - CCTCACAGGTTCCCTATATCAGCTT ATGGAAGGTGGATTAGACAGAGAGG 248 - -
CPH14 MSAT (CCA)14 GAAAGACAATCCCTGAAATGC ACCCCATTTATGAGAATCATGT 182_203 62 0.70