Map of CFA02

Marker Name Marker Type Repeat/Gene Name Forward Primer Reverse Primer BP-Size Run T PIC
FH2274 MSAT (GAAA)~33 TCACCCTCATCCATCTCAGA ACGCCAGACACAAAAAGACA 320 58 -
AHTH72Ren CSM - TTTAGCATTTTCCTCTGGCTTT ATCTGGTCTGTTTGCCTTCC 172 - -
REN309A12 MSAT (CA)10 CCTTTACATCCATAGCCAACC TAGGGTGCAGCTACAGTGGA 213 60 0.54
FH3006 MSAT (GAAA)20 CCCTCAGTAACACCTCCTAGC GGGATTAAGTCCTGAATTGG 246 58 -
REN149E24 MSAT (CA)17 GGGATGGCTATACAACTCTGAA CTGCTTTCTCTCTGGGGATG 365 60 0.78
REN244F02 MSAT (CA)15 ACTGTGTATGGCTCGGGAAC CAGGCACCTGTGTTGTGAGT 222 60 -
D02009 MSAT (GT)15(GA)15 TAAAGTTTCCTCATTTTCAGT ATCCTTCTGCTTTTTGCCTAATA 143 - 0.62
REN214B19 MSAT (CA)14 imp AAGTCTCAACCGACCCAACA TTCCTAACCTCCTTTGCCCT 298 60 0.46
EST-CFZ97732 GENE - GAGAACAAGCACAAGAGGCA GTCATGATCTCGGGGTTCTG 126 - -
FH2087A MSAT (GAAA)50 CTGCCACATTCACTGATGC CAACTCCCTCCCTCATTTCA ~300 58 -
CPH7 MSAT (TG)16 ACACAACTTTCCATAATACTTCCCA ATCAATGCTCTCCTCCCCAG 165_173 62 0.15
FH2431 MSAT TETRA Repeat TGGTCAACAAAGTCAAGAGTTG GGCAGTAAAAAGGAGCACAA 284 58 -
GDI-2 GENE GDP dissociation inhibitor isoform 2 ttagcatcagcgacctcctt gagccggtcatcctcttgta 147 - -
REN303H07 MSAT (CA)10 imparfait TAAGATGAATCCGGAGACGG CAACCCCGAAGAACCACTTA 345 60 0.72
REN95G07 MSAT (CA)12 CCCCTAAGAAAACTCACAG TTACTTTTCCCTCGTCAGC 198 49.2 0.64
REN44A17 MSAT (CA)13 AGTTATCTTCCGTCTCAG CCATTCTCGTCCTCTTTA 102 46.3 ND
REN280B15 MSAT (CA)20 TTGTTCCCAGACCAACTTCC AGCATGAAAGGAGGAAAGCA 234 60 0.76
REN132G16 MSAT (CA)5TA(CA)5 TTCCATTTGCCTCCTTCTG GGGCACACCATCACTTCA 180 50.6 0
CUBN GENE cubilin gene aatatcagtggaaaacaacaaactt gtggttcagtcaggtaagcatct 199 - -
C02.609 MSAT (CA)12 CCACAATTTAATTTTTTTCCCA ACTGCTGCTAACAGGTCTTGG 190 55 -
VIM MSAT/CSM Vimentin* / (CA)21 TAGCCTAAGGGGAATACC CTTTAAGCTGATGAGTTTTG 307 58 -
EST-CFZ97757 GENE - GACAGCAGGAAAACTTCCCA ATTGCTGGGCCCTAACTCTT 202 - -
FH2848 MSAT (CA)22 CAAAACCAACCCATTCACTC GTCACAAGGACTTTTCTCCTG 237 58 -
REN171A19 MSAT (CA)11 TA(CA)4 ATTTCAGCCATTGTTCCTGG AGGAGCATGGGAGTCTGTGT 104 60 -
FH2608 MSAT TETRA Repeat CTACACCCTGCTTGTGCTCT TCCTCATATAATGTGCTGACCA 246 58 -
REN154C04 MSAT (CA)17 TTGCAAATGGCAAGATTTCA TATGGAAAGAGGCCCAATCA 141 60 -
REN115P05 MSAT (CA)14 ACACATACCCTCATCTA TTCTATTGTGCTGCTTGTT 120 43.7 0.38
REN124H05 MSAT (CA)12 GACAGTCTCATAGGTAGTT TAGGAGCGTGGTTTTTC 139 48.6 0.46
REN258P02 MSAT (CA)14 ACCACTCAGAGAGAACCACTTC TTCCCTAATAGTCCCCCTGC - 60 -
REN70M14 MSAT (CA)16 TGGGTCAGAATCTCCTAATG TAAAAAGCGTGTATACTGAAGATG 232 50.8 0.64
FH2237 MSAT (GAAA)~45 AGGCTGACCTTATCTTTCAACTG CAACACAGATGAAACTGGAAGG 590 ND -
SMN GENE Survival motor neuron GTGGAAAGTTGGTGACAAATG CTCCTGAGTATCCTGTTCTAC ND ND -
OCLN GENE Occludin TCTGCAACGTTGTCAGAAGG ACTCAGTCCTTTAGCACAACAGC 204 55 -
FH2613 MSAT TETRA Repeat AACAATGAAAAGGAATGCCA TAATAGCTGCTTTGAAGCCTTC 189 58 -
C01802 MSAT (TG)19 ATGCAAGTTCTAAAACCATACTG TAGTGAAGACAGGATTGTGTTG 137 ND 0.46
C02.466 MSAT (TG)13 TCTGGATTGTGGTCACAACC ACTGGACACTTCTTTTCAGACG 199 55 -
FGF1 GENE Fibroblast growth factor 1,acidic CAACATGAAGCCCAAACTCC GTGCTGGTCGCTCCTGTC 103 60 -
REN107M12 MSAT (CA)13 TGCTTATGCTTGCTCTATCT CTTCATCCGCATCATTGTAA 241 47.9 0.18
FH2845 MSAT (CA)12 TCTCTGTGCTTCAGCTTCATC GTCTTGGAGAGCAGGAACAG 191 58 -
REN150M24 MSAT (CA)21 CACCAGAATCATTTCCACGA CTGTGGAGAGCCTGATGTGA 347 60 0.76
REN48A11 MSAT (CA)13 CAGTGTGAATTCGGGGCT AAAAATATTATACAACAGTCC 342 51.7 ND
REN60B17 MSAT (CA)13 TAAAAGTGCCATCTACCT GGGCCAGTCGTCAAAGGG 122 49.9 0.41
C02.894 MSAT (CA)N TCAGCATCTAGAAAATTAGGT ACTCATTTTCTCTTATTCTGCAG 141 58 -
REN236D24 MSAT (CA)9 TCTCCAGAAAAGTCTTCAGCAA TGCTTCTCACTCTGCCTGTG 139 60 0
EST-CFZ97733 GENE - ATGAGGTAAAAGGGGAGGGA TAGCAGCCTTTCTCAGAGCC 304 - -
FH2132 MSAT (GAAA)12(GGAA)10(GAAA)~16 CACTGGGAGTGGAGACTGCT TGCACAGCCAACTAGAGGTG 272 60 -
C02.030 MSAT (GT)4(CA)13 GCCTTTTAGGGAGCTTTCTTT GAGTCTGCTTTTCTCCTTCCC 150 ND -
RDC4 GENE RDC4-G protein coupled receptor CCGGAAAGCCTCCTAGTCTGATTT CCCAAGACATCAGGATTGACCC 118 60 -
FUCA1 GENE Alpha-l-fucosidase ACTGTTCCTGTCACCATGGAG CCCACCACTCTTAGTCAGAAGG 227 55 -
FH2062 MSAT (GAAT)9 GGCTTCTGGAGACAGGCAT CAGAACGCTGTCTAGCCCTT 136 58 -
REN187L04 MSAT (CA)11 ACCACCCACACAATCCTCAT AGGAGGTGAGGCAGAGTGAA 313 60 0
AHT111 MSAT (AC)17AT(CA)2 CCATACCCAGGATAGTTGAT CCATCCTGAGGCTAGCTGTG 074-093 58 -
C06605 MSAT (GT)19 TCCTCCTTAGGGACTGTACCC GCATCACAGACGTGTCAGGAAC 131 58 -
DDOST GENE Oligosaccharyltransferase 48kda subunit AGGCACTTGGGAGTTCTGCG AGTGCCGCATCTTCCCTGAG 107 60 -
AHTH255Ren CSM - GTCCCAAAGGCTTTCCAAAT GATGGCTGGGTCCTGTCTTA 168 - -
GP40 GENE Mucin type membrane protein gp40 TCCTCTAGGCAGGCATCTGT GAACGTCGCACTCAACTCAA 251 60 -
NPPA GENE Natriuretic peptide precursor A GCCCAGAGAGATGGGGGTG CGGAAGCTGTTACAGCCCAGTC 182 60 -
C02.342 MSAT (CA)15 TCTTTGAAATGAAATGGGCC GCTCTCATCCCTGTGAAAGC 184 55 -
REN315H04 MSAT (CA)14 TTTTCCCGTGAGTGTTTTCC AAGTGGGGAGCATGAACATC 158 60 0.70