Map of CFA01

Marker Name Marker Type Repeat/Gene Name Forward Primer Reverse Primer BP-Size Run T PIC
REN285G14 MSAT (CA)9 AACATGGTGACGAGAAGGCT CCATTCGCCACAAGTAGGTT 134 60 ND
REN303J04 MSAT (CA)11 ATTTTCGCTCCTTTCCCCTA CTCAGTGCCCATCGAAAAAT 270 60 0.46
REN138G03 MSAT (CA)6TA(CA)7 GGTATCATTGGGGAAAAGAAA AGTGCCCCTGGTTGAGAATA 176 50.8 0
FH2016 MSAT (GAAA)~25 CATTTTTAAGGATGGAGACAGC AACAGTGTCCCATGGCCTAC 268 58 -
REN242N13 MSAT (CA)11 GCACATGGTTGGTGAGAATG TTCTCCAATTGGCTTGGTTC 376 60 0.76
AHTK338 MSAT/CSM (GT)12 ACAAAGCAATTTTTGCTACAAGC TAATAGGTGTGGGACATTCGTT 291 - -
REN276B08 MSAT (CA)13 GTTGTGACAGCAACCCCTTC CGGATGCTTTCTAGGAGTGC 205 60 0.56
FH2313 MSAT (GAAA)~15+~12 AGTAGAAGAGGCCACGCAAA CACGAAGAAAGCCATGGTTT 267 ND -
REN189i14 MSAT (CA)12 TTTTCCAAAATGAAAACCTGC CAACAATTCCTTTGTTGGTGC 227 60 0.54
REN280C08 MSAT (CA)15 GTGTGTATGGGAGCGGAGTT GCAGCCACCTAATTCGAAAC 294 60 0.18
REN307D02 MSAT (CA)23 CAGACATAAGATGCTCGCCC CCCTTGGGAACTTGAAAACA 240 60 -
REN136G19 MSAT (CA)9 GCTCAGAGGCAGATAGAAA CTGCACCAAAGAAACTCC 159 52.8 0.48
C01.673 MSAT (GT)17 CCACCACTTACATAAACATGGC TTCCAGACTGCTGCCTCC 166 55 -
RAB2L GENE Rab2-gtp binding protein ATGAGAAAATCCAAGAAGGAGTCTT CCTGCTGTCCTCCCTGATT 177 55 -
C-MYB GENE c-myb TCTTTTCTCTTTgggTgTgTgA TgACTCAgCgTAATCATTCTTCA 204 - -
REN135K06 MSAT (CA)13AT(CA)5 AATTGATTCATGACCCACTAA GGACCTATTCTGAAGCCTAAC 152 49.3 0.46
C01.246 MSAT (AC)10(AG)11 GACTTCATTCATCCATTCATGA GGATCGAGTCCAACGTGG 127 ND -
REN162B09 MSAT (CA)12 CAAACTTGACAGTCTtTTCAGGA GCATTCAAGATGCACCAATG 180 60 0.88
REN112I02 MSAT (CA)18 ATAGCCCATGAAATCCA CCCCAAATACATCCCTACAT 250 50.3 0.76
REN288J16 MSAT (CA)24 GGGTTTCGTTAAGGGAGGAA AGAGTTTGGAGGGCACAGAC 102 60 0
MAS GENE mas protooncogene(HuEST-M13150) TTCGCTATGCCCATGAG ATCTTTGAAAGCCCTGGTC 198 45 -
REN210H04 MSAT (CA)8 imp TGTGCATATGTGCATGTATGTGT CCTGGGTGTTAGTCCTTCCA 217 60 ND
DGN3 MSAT (TCTA)12 TTTTTTCTGTAAACCTAAAGCTGC GGAAAGGTACAGGCATGTAGTTGG 200 - -
C01.424 MSAT (GT)16 AGCTTAGCTTACTGCCCTGG TCCTTTGGTTTTTAGCAGGG 177 ND -
AHT107 MSAT (AC)17 TCCCCGGCCCCTGCCCGGAG TCTGTGCCCACCTGTGGAGC 76 63 -
REN256I19 MSAT (CA)18 CATGTGTAGCTTTGGGCAAG TCCAAAAATCAGCAATGCAA 199 60 0.69
PLN GENE Phosholamban GAAAAGGTCAAGATTCAGAACAAAA TTTTACAAGCTTTGTTGAGGAATTC ND ND -
C02509 MSAT (CA)18 TGGCCTAAACACCTCTGACAT TGGGATACAAAGTAAATGGAAC 189 ND 0.50
C01.236A MSAT (TG)12 GAGCCTGCTTCTCCCTCTG TCTTTATTGTTACCATTTGCCA 200 55 -
C01.251 MSAT (CA)17 TACCACTGTCATTTTTCCATGC AAGAGGATACCGGTGGCAG 146 58 -
REN97F15 MSAT (CA)9 CACGTGTGGCCTTCTTCT TTCATCAACTTCACTCATCTG 201 47.1 0.34
AHT117 MSAT (CA)17 GCCTGCGTGGTACACACACA GTTTACCTGCCATCATCTCA 84-88 58 -
REN172C02 MSAT (CA)14 CCCTTAGGAGGAGGCAAGAC CGTGCTTTGTTATGGCTTGA 344 60 0.48
D01505 MSAT (GC)9(AC)13 CCAAGGGGTATGTTGTCTATTACT CAGCATGAAGGATCTCTGACTA 157 - 0.54
REN04H08 MSAT (CA)22 GGGTGGGAAATGTGACTCTG ACTAACTCGCCAGACTATTC 100 49 0.48
C00901 MSAT (AC)12 TAAAGGTCCATTGATAGAGGA TGATCCCAGGAGTTCATTCTT 105 - 0.54
REN159F24 MSAT (CA)19 GGGCTGCCCATTTCTTTAAT CCCTCCACCAATCTCTTCAC 256 60 ND
REN293E04 MSAT (CA)16 AAAAAGGGAGCATGGGCTAT TGCTGCAGGAATAAAATCATC 270 60 0.34
REN04K01 MSAT (GT)17 AATATAAATGAAAAAGAACA ATAATGAAGGAGAAAGGACT 161 46 0.39
REN192P12 MSAT (CA)16 TGCTGTATGTCAACAATACTTCAAT GCACTTTAGAAGAAAGCCTGG 154 60 0.5
FH2309 MSAT (GAAA)~27 GACTGAGTTCTTTCAGCACAGTG GGCAGCCTTATTATTCATGGA 380 ND -
REN47D17 MSAT (CA)19 GGCACTTGAGCTCTAATCCTA TGCTAATGAATCCACAGAATG 366 52.2 0.70
ZO2 GENE Tight junction protein TATAGATGCCTGATAGTCGGCGTGT AAGACCCAGTTCCACAAACAGAGC 201 60 -
L33987 GENE Gene from CpG-enriched DNA ATCTTCTTGGCGGCAAC AAACATCGTGTCCCCTG 161 43 -
AHT138 MSAT (GT)5AC(GT)11TT(GT)6 ACTTGGACCAGACAAGGGTG GGATTTGCCTATGCACTACACA 101-109 58 -
REN211B17 MSAT (CA)16 CTTACTCAATCCCTCCGTGC GGTTGCATGTTGCAAAGAAG 220 60 ND
C01.643 MSAT (GA)11(GT)15 AAGTCTCCTGACGATGAACACA CCTAGAGTCTGCTGGAGATTGC 180 55 -
REN123E09 MSAT (CA)16 CTGCGCCAGAAGTGTCAT TGTTTTGGGAAGAACTCAGTC 104 51.6 0.75
C01.164 MSAT (TG)19 CTTCTCCCTCTGCCTGTGTC GGCATGTGCTTTAAAATTTTCT 172 55 -
REN04I24 MSAT (CA)10 TATCTTGGCTCCATTTCAG AATCACGGCCTCACGAACTC 273 52 ND
REN06N11 MSAT (CA)10 AAAATAACACAGCATCAGG ACACAGGCACAGGAGCATC ~245 54 ND
ARGES GENE Arginine esterase GACCCTGATGAAAGGGAGGATAATG CCCTGCCCAACATGGTCTTC 211 60 -
FH2326 MSAT (GAAA)~42 GAATCCCCAATGTACATGGC CAGCCATCCAGGAAATCG 251 ND -
CAN2DD GENE CAN2DD dimeric dihydrodiol dehydrogenase atctctgctcagctctctaatatgg ttccttatttcttcaaggatgtcag - 60 -
LHB GENE Luteinizing hormone beta subunit ATGAGCTGCACTTTGCTTCCATC TCCTTAGAGGAACAGGAGGCCC 191 60 -
C5R1 GENE Complement c5a receptor CCCCCTCTGCTGATTTTAACCC TCCCATGCACAATCTCCACCT 240 60 -
REN223C18 MSAT (CA)17 TGTGTCCAGCATGTGTCTGA GATGGGTGTGAGGGAGAGAG 301 60 0.5
FH2634 MSAT TETRA Repeat AAAGATTGTCTTGACACGCTG GAAGGAAGGAAGGAAGAAAAGA 343 58 -
FH2598 MSAT TETRA Repeat CCTTGACTCAGCAGCCCTAC CGACCTATCCATACATGCCC 341 ND -
VASP GENE Vasodilator-stimulated phosphoprotein TCCCTGCCTCAACTCGACTTG CCAATCCCCAACAGAGGAACC 220 60 -
P450IIb GENE Cytochrome p-450 II b TCTTCCTGCCACTGAAAGACCC GTCAAATCTCCCCTTAATCCCCAG 208 60 -
FH2294 MSAT (GAAA)~15 GGGTCCTGGGATCAAGCC TTAGTAAAGAGACAGCTGATTGCC 227 ND -
REN229P15 MSAT (CA)25 ACTGACTGATGTCCTGTGCG ATCTACCCTGCAACCCTGTG 322 60 0.80
RYR1 GENE Ryanodin receptor 1,skeletal TGATGGGCATCTTTGGTGAT TCACAGACTCTGGTAACTTCATCTG 258 55 -
ATP1A GENE H+,K+ -ATPase alpha subunit ACCATCATCGGGCGCATT CATAGGCTACCACGATGGCCAT 202 60 -
AHTH304Ren CSM - CTCCTTGGTCCCCTCTTTTCTC TATTCATTTCTCCCTGTGTCCAATC 249 - -
REN143K19 MSAT (CA)11TA(CA)2 GTCAGAGCCCCAGAGACAAG CTTTCTTCCGCCACTACCTG 138 60 0.50