Human Allele Frequencies for 214 SNP Sites With Ancestral Allele Assignments

Figure 5.  Human allele frequencies for 214 SNP sites with ancestral allele assignments

	Human Alleles		Human Allele Frequencies
MARKER	A Allele	B Allele	Freq A	Freq B	Ancestral Allele
SGC30055.32	A	G	0.57	0.43	'B' = G
SGC30160.57	A	G	0.95	0.05	'A' = A
SGC30374.82	T	C	0.59	0.41	'A' = T
SGC30598.70	T	C	0.99	0.01	'A' = T
SGC30610.99	A	T	0.38	0.62	'B' = T
SGC30612.39	A	G	0.95	0.05	'A' = A
SGC30719.53	G	A	0.87	0.13	'A' = G
SGC30895.72	T	C	0.37	0.63	'B' = C
SGC30914.75	T	C	0.99	0.01	'A' = T
SGC30985.75	A	G	0.67	0.33	'A' = A
SGC31049.98	C	T	0.89	0.11	'A' = C
SGC31141.40	T	A	0.70	0.30	'B' = A
SGC31209.47	T	C	0.96	0.04	'A' = T
SGC31224.47	A	G	0.79	0.21	'A' = A
SGC31233.85	A	G	0.30	0.70	'A' = A
SGC31299.57	C	G	0.41	0.59	'B' = G
SGC31303.117	C	T	0.58	0.42	'A' = C
SGC31324.45	A	C	0.82	0.18	'A' = A
SGC31534.159	A	T	0.79	0.21	'A' = A
SGC31596.24	C	T	0.40	0.60	'A' = C
SGC31656.88	G	A	0.94	0.06	'A' = G
SGC31729.128	G	A	0.84	0.16	'A' = G
SGC32060.115	T	G	0.09	0.91	'B' = G
SGC32190.27	C	T	0.86	0.14	'A' = C
SGC32577.91	T	G	0.03	0.97	'B' = G
SGC32590.86	A	G	0.96	0.04	'A' = A
SGC32638.97	T	C	0.69	0.31	'B' = C
SGC32641.26	C	T	0.88	0.12	'A' = C
SGC32859.78	A	G	0.30	0.70	'B' = G
SGC32871.128	C	T	0.94	0.06	'A' = C
TIGR-A004S34.156	C	T	0.45	0.55	'B' = T
TIGR-A004T44.69	G	A	0.60	0.40	'B' = A
TIGR-A005E46.76	A	G	0.83	0.17	'A' = A
WI-10019.139	A	T	0.95	0.05	'A' = A
WI-10289.29	T	C	0.36	0.64	'B' = C
WI-10316.104	T	C	0.08	0.92	'B' = C
WI-10567.146	A	C	0.30	0.70	'A' = A
WI-10686.133	C	T	0.94	0.06	'A' = C
WI-10694.144	A	G	0.82	0.18	'B' = G
WI-10732.80	C	A	0.72	0.28	'B' = A
WI-10778.62	A	G	0.21	0.79	'A' = A
WI-10810.58	C	T	0.63	0.37	'A' = C
WI-11169.95	A	G	0.62	0.38	'B' = G
WI-11206.127	A	T	0.89	0.11	'A' = A
WI-11222.136	G	A	0.97	0.03	'A' = G
WI-11222.25	C	T	0.72	0.28	'A' = C
WI-11352.69	T	C	0.63	0.37	'A' = T
WI-11371.84	C	T	0.39	0.61	'B' = T
WI-11466.26	C	T	0.60	0.40	'A' = C
WI-11585.79	T	C	0.87	0.13	'A' = T
WI-11614.60	A	G	0.63	0.37	'A' = A
WI-11636.61	A	G	0.79	0.21	'A' = A
WI-11696.47	T	C	0.58	0.42	'A' = T
WI-1172.179	C	T	0.24	0.76	'B' = T
WI-11758.61	A	G	0.72	0.28	'A' = A
WI-11790.28	A	G	0.48	0.52	'A' = A
WI-12018.31	A	T	0.91	0.09	'A' = A
WI-12159.28	C	T	0.50	0.50	'A' = C
WI-12169.121	G	C	0.68	0.32	'B' = C
WI-12210.76	A	G	0.61	0.39	'B' = G
WI-1231.126	T	C	0.74	0.26	'A' = T
WI-12310.46	G	A	0.97	0.03	'A' = G
WI-12319.109	T	C	0.86	0.14	'B' = C
WI-12326.25	G	A	0.91	0.09	'A' = G
WI-12535.50	A	T	0.96	0.04	'A' = A
WI-12601.42	T	C	0.57	0.43	'A' = T
WI-12634.52	T	C	0.14	0.86	'B' = C
WI-12648.41	A	G	0.46	0.54	'A' = A
WI-12837.87	A	G	0.49	0.51	'A' = A
WI-13020.108	G	A	0.97	0.03	'A' = G
WI-13367.84	C	G	0.78	0.22	'A' = C
WI-13416.71	C	A	0.78	0.22	'A' = C
WI-13424.66	G	A	0.94	0.06	'A' = G
WI-13477.32	A	G	0.53	0.47	'B' = G
WI-13529.42	T	C	0.62	0.38	'A' = T
WI-13551.74	G	A	0.91	0.09	'A' = G
WI-1356.123	T	C	0.62	0.38	'A' = T
WI-13602.89	G	T	0.76	0.24	'A' = G
WI-13744.115	C	T	0.39	0.61	'A' = C
WI-13752.106	T	C	0.88	0.12	'A' = T
WI-13794.52	A	G	0.44	0.56	'A' = A
WI-13810.106	T	C	0.74	0.26	'A' = T
WI-13892.50	G	A	0.87	0.13	'A' = G
WI-13909.80	G	A	0.70	0.30	'B' = A
WI-14083.47	C	T	0.21	0.79	'A' = C
WI-14136.120	G	A	0.54	0.46	'A' = G
WI-14138.23	C	T	0.95	0.05	'A' = C
WI-14288.85	G	C	0.60	0.40	'B' = C
WI-14319.83	C	T	0.41	0.59	'B' = T
WI-14323.78	T	C	0.58	0.42	'A' = T
WI-14339.102	T	G	0.89	0.11	'A' = T
WI-14546.95	C	A	0.67	0.33	'A' = C
WI-14580.100	G	A	0.72	0.28	'A' = G
WI-14867.46	T	C	0.65	0.35	'A' = T
WI-14898.50	A	C	0.70	0.30	'B' = C
WI-14907.48	G	A	0.80	0.20	'A' = G
WI-14913.88	C	A	0.64	0.36	'A' = C
WI-14930.55	C	T	0.71	0.29	'A' = C
WI-15000.90	G	A	1.00	0.00	'A' = G
WI-15123.55	C	T	0.47	0.53	'B' = T
WI-15182.49	C	A	1.00	0.00	'A' = C
WI-15198.38	T	C	0.18	0.82	'B' = C
WI-15215.84	G	C	0.80	0.20	'A' = G
WI-15225.80	C	T	0.68	0.32	'A' = C
WI-15239.57	T	C	0.49	0.51	'B' = C
WI-15260.75	G	A	0.81	0.19	'A' = G
WI-15295.27	G	C	0.86	0.14	'A' = G
WI-15389.33	G	A	0.38	0.62	'B' = A
WI-15719.69	A	C	0.69	0.31	'A' = A
WI-15729.35	A	G	0.75	0.25	'A' = A
WI-15801.24	G	A	0.81	0.19	'A' = G
WI-15843.62	C	T	0.01	0.99	'B' = T
WI-15964.99	T	A	0.86	0.14	'A' = T
WI-16083.89	C	T	0.83	0.17	'A' = C
WI-16156.97	A	C	0.78	0.22	'A' = A
WI-16632.71	A	G	0.52	0.48	'A' = A
WI-16644.42	G	A	0.31	0.69	'B' = A
WI-16857.47	G	A	0.24	0.76	'A' = G
WI-16879.79	C	T	0.58	0.42	'A' = C
WI-16882.99	A	G	0.81	0.19	'A' = A
WI-16905.75	C	T	0.90	0.10	'A' = C
WI-16918.93	C	T	0.23	0.77	'A' = C
WI-16947.58	C	G	0.39	0.61	'B' = G
WI-16995.55	T	C	0.26	0.74	'A' = T
WI-17010.23	T	C	0.89	0.11	'A' = T
WI-17044.47	G	T	0.79	0.21	'B' = T
WI-17066.32	A	C	0.44	0.56	'A' = A
WI-17114.37	T	C	0.82	0.18	'A' = T
WI-17150.76	T	G	0.44	0.56	'A' = T
WI-17198.38	A	C	0.75	0.25	'A' = A
WI-17347.50	A	G	0.24	0.76	'B' = G
WI-17519.55	T	C	0.55	0.45	'A' = T
WI-17675.103	T	C	0.46	0.54	'A' = T
WI-17687.107	C	G	0.92	0.08	'A' = C
WI-17690.63	G	A	0.62	0.38	'B' = A
WI-1775.47	C	T	0.76	0.24	'A' = C
WI-17857.34	T	G	0.82	0.18	'A' = T
WI-17892.76	T	C	0.97	0.03	'A' = T
WI-18052.50	T	C	0.39	0.61	'A' = T
WI-18054.46	G	A	0.07	0.93	'B' = A
WI-18064.54	G	A	0.97	0.03	'A' = G
WI-18115.70	C	T	0.91	0.09	'A' = C
WI-18169.115	A	G	0.68	0.32	'A' = A
WI-18181.100	A	C	0.54	0.46	'A' = A
WI-18190.62	G	A	0.79	0.21	'A' = G
WI-18232.60	T	A	0.96	0.04	'A' = T
WI-18242.30	G	A	0.92	0.08	'A' = G
WI-18266.97	C	T	0.34	0.66	'B' = T
WI-18312.73	A	G	0.59	0.41	'A' = A
WI-18327.104	G	A	0.54	0.46	'B' = A
WI-18330.49	G	A	0.56	0.44	'B' = A
WI-18357.89	C	G	0.75	0.25	'A' = C
WI-18369.58	G	A	0.95	0.05	'A' = G
WI-18449.129	C	T	0.26	0.74	'B' = T
WI-18491.109	G	A	0.78	0.22	'A' = G
WI-18694.41	A	T	0.90	0.10	'A' = A
WI-2028.176	T	C	0.22	0.78	'B' = C
WI-2033.183	T	C	0.09	0.91	'A' = T
WI-2296.81	A	G	0.62	0.38	'A' = A
WI-2300.77	G	T	0.38	0.62	'B' = T
WI-2371.55	G	T	0.88	0.12	'A' = G
WI-2440.71	G	A	1.00	0.00	'A' = G
WI-2716.23	T	C	0.90	0.10	'A' = T
WI-2886.46	C	A	0.98	0.02	'A' = C
WI-2906.50	A	C	0.28	0.72	'B' = C
WI-2924.54	G	A	0.89	0.11	'A' = G
WI-3203.99	G	A	0.68	0.32	'A' = G
WI-3208.140	G	A	0.89	0.11	'A' = G
WI-3402.55	G	A	0.83	0.17	'B' = A
WI-3453.70	C	T	0.33	0.67	'B' = T
WI-3473.101	A	G	0.84	0.16	'B' = G
WI-3474.90	A	G	0.22	0.78	'A' = A
WI-3502.79	C	T	0.54	0.46	'B' = T
WI-3600.146	G	C	0.61	0.39	'A' = G
WI-3600.78	T	G	0.84	0.16	'A' = T
WI-3867.49	T	C	0.63	0.37	'B' = C
WI-4019.33	G	A	0.62	0.38	'A' = G
WI-4160.117	A	G	0.74	0.26	'B' = G
WI-4168.32	A	G	0.77	0.23	'A' = A
WI-4255.68	G	C	0.42	0.58	'B' = C
WI-4529.64	T	C	0.82	0.18	'B' = C
WI-4606.61	A	G	0.55	0.45	'B' = G
WI-4722.88	G	A	0.81	0.19	'B' = A
WI-478.46	C	T	0.78	0.22	'A' = C
WI-4788.65	A	G	0.83	0.17	'A' = A
WI-4818.121	G	T	0.68	0.32	'A' = G
WI-4888.56	G	A	0.90	0.10	'A' = G
WI-5257.77	C	A	0.82	0.18	'A' = C
WI-5300.38	T	C	0.35	0.65	'A' = T
WI-5481.131	A	G	0.45	0.55	'B' = G
WI-5546.40	C	T	0.74	0.26	'A' = C
WI-5636.26	A	C	0.00	1.00	'B' = C
WI-5944.52	A	G	0.52	0.48	'B' = G
WI-6272.86	C	T	0.41	0.59	'B' = T
WI-6523.165	G	T	0.99	0.01	'A' = G
WI-6686.151	A	G	0.35	0.65	'A' = A
WI-7059.43	C	G	0.81	0.19	'A' = C
WI-7423.107	T	C	0.25	0.75	'B' = C
WI-7753.52	A	G	0.42	0.58	'B' = G
WI-7836.120	T	C	0.62	0.38	'A' = T
WI-7848.142	A	G	0.30	0.70	'B' = G
WI-8183.56	G	A	0.94	0.06	'A' = G
WI-8540.73	T	C	0.84	0.16	'B' = C
WI-863.107	A	G	0.64	0.36	'A' = A
WI-8827.22	C	T	0.24	0.76	'B' = T
WI-8850.21	A	G	0.31	0.69	'B' = G
WI-8865.42	T	C	0.25	0.75	'B' = C
WI-9005.26	C	T	0.78	0.22	'A' = C
WI-9063.53	A	C	0.27	0.73	'B' = C
WI-9174.47	T	C	0.56	0.44	'A' = T
WI-9186.76	G	A	0.62	0.38	'A' = G
WI-9231.32	G	C	0.72	0.28	'A' = G
WI-9304.70	G	A	0.16	0.84	'A' = G
WI-9360.79	T	C	0.50	0.50	'B' = C