 |
Apes Project
Raw Data
In each case, the 214 sites with assigned ancestral alleles were evaluated.
Figure 2. Primary Nucleotides
| |
|
current human alternative allele |
| |
|
A |
G |
C |
T |
|
ancestral allele |
A |
- |
75 |
14 |
10 |
|
G |
86 |
- |
13 |
16 |
|
C |
16 |
13 |
- |
86 |
|
T |
10 |
14 |
75 |
- |
Figure 3. 5'-Nearest Neighbors Raw Data
| |
|
current human alternative allele |
|
|
current human alternative allele |
| |
|
AA |
AG |
AC |
AT |
|
|
CA |
CG |
CC |
CT |
|
ancestral allele |
AA |
- |
17 |
3 |
1 |
|
CA |
- |
28 |
5 |
4 |
|
AG |
21 |
- |
6 |
4 |
|
CG |
25 |
- |
0 |
0 |
|
AC |
8 |
5 |
- |
22 |
|
CC |
2 |
2 |
- |
22 |
|
AT |
4 |
3 |
27 |
- |
|
CT |
1 |
3 |
15 |
- |
| |
|
|
|
|
|
|
|
|
|
|
|
| |
|
GA |
GG |
GC |
GT |
|
|
TA |
TG |
TC |
TT |
|
ancestral allele |
GA |
- |
10 |
2 |
0 |
|
TA |
- |
20 |
4 |
5 |
|
GG |
19 |
- |
3 |
6 |
|
TG |
21 |
- |
4 |
6 |
|
GC |
3 |
0 |
- |
17 |
|
TC |
3 |
6 |
- |
25 |
|
GT |
5 |
4 |
16 |
- |
|
TT |
0 |
4 |
17 |
- |
Figure 4. 3'-Nearest Neighbors Raw Data
| |
|
current human alternative allele |
|
|
current human alternative allele |
| |
|
AA |
GA |
CA |
TA |
|
|
AC |
GC |
CC |
TC |
|
ancestral allele |
AA |
- |
17 |
4 |
0 |
|
AC |
- |
16 |
4 |
5 |
|
GA |
25 |
- |
6 |
3 |
|
GC |
17 |
- |
0 |
3 |
|
CA |
6 |
4 |
- |
21 |
|
CC |
6 |
3 |
- |
19 |
|
TA |
5 |
4 |
20 |
- |
|
TC |
0 |
2 |
10 |
- |
| |
|
|
|
|
|
|
|
|
|
|
|
| |
|
AG |
GG |
CG |
TG |
|
|
AT |
GT |
CT |
TT |
|
ancestral allele |
AG |
- |
15 |
3 |
1 |
|
AT |
- |
27 |
3 |
4 |
|
GG |
22 |
- |
2 |
2 |
|
GT |
22 |
- |
5 |
8 |
|
CG |
0 |
0 |
- |
25 |
|
CT |
4 |
6 |
- |
21 |
|
TG |
4 |
5 |
28 |
- |
|
TT |
1 |
3 |
17 |
- |
|
Comments, suggestions and problems to
bioinformatics@nhgri.nih.gov
|
 |