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Apes Project


Raw Data


In each case, the 214 sites with assigned ancestral alleles were evaluated.
Figure 2.   Primary Nucleotides

    current human alternative allele
    A G C T
ancestral allele A - 75 14 10
G 86 - 13 16
C 16 13 - 86
T 10 14 75 -

Figure 3.  5'-Nearest Neighbors Raw Data

    current human alternative allele     current human alternative allele
    AA AG AC AT     CA CG CC CT
ancestral allele AA - 17 3 1   CA - 28 5 4
AG 21 - 6 4   CG 25 - 0 0
AC 8 5 - 22   CC 2 2 - 22
AT 4 3 27 -   CT 1 3 15 -
                       
    GA GG GC GT     TA TG TC TT
ancestral allele GA - 10 2 0   TA - 20 4 5
GG 19 - 3 6   TG 21 - 4 6
GC 3 0 - 17   TC 3 6 - 25
GT 5 4 16 -   TT 0 4 17 -

Figure 4.  3'-Nearest Neighbors Raw Data

    current human alternative allele     current human alternative allele
    AA GA CA TA     AC GC CC TC
ancestral allele AA - 17 4 0   AC - 16 4 5
GA 25 - 6 3   GC 17 - 0 3
CA 6 4 - 21   CC 6 3 - 19
TA 5 4 20 -   TC 0 2 10 -
                       
    AG GG CG TG     AT GT CT TT
ancestral allele AG - 15 3 1   AT - 27 3 4
GG 22 - 2 2   GT 22 - 5 8
CG 0 0 - 25   CT 4 6 - 21
TG 4 5 28 -   TT 1 3 17 -






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